Transcript Information: R_Transcript_29251.p1


Annotated TAIR IDAT4G20380.8
Annotated Gene NameLSD1 zinc finger family protein
Annotated Gene Symbol(s)LSD1
Annotation TypeOrtholog
Chromosome Positionchr4:11005027-11006438 | Forward length=210
E-Value2.4E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.27042061012
Replicate 219.72729324828
Replicate 324.794655529901
Condition 2: 8 Hour
Replicate 121.122421959986
Replicate 228.87256721252
Replicate 327.127681806293
Condition 3: 24 Hour
Replicate 117.155284521801
Replicate 218.056228432396
Replicate 319.001413958955


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29251.p1 GENE.R_Transcript_29251~~R_Transcript_29251.p1 ORF type:complete len:182 (+),score=18.54,zf-LSD1|PF06943.8|3.4e-13,zf-LSD1|PF06943.8|1.9e-09,zf-LSD1|PF06943.8|4.9e-13 R_Transcript_29251:382-927(+)
ATGCAGAACCAGCTTCTTTGCAGCGGTTGTAGGACTATACTTTTATACCCTAGAGGAGCAGCAAATGTCCGTTGTGCTGTGTGTAATACAATTACTCCTGTTCACCCTACTGGATTGGAAATGGATCGGATTATATGTGGGTGTTGTCATACATTACTAATGTACTCACGTGGGGCAACCAGTGTGAGATGCCTTTGTTGTCAGACAGTGAATCTCACGAGTACGAATGCTTCTCCAGCACAAAACCAGGTAGCCACAGTCCGTTGTGGAAGTTGTCAGATGACACTTATGTATCCTTATGGAGCACCATCAGTCAAATGTGCTGTTTGTCACTATATCACGAATGTTGGAACAACCAACAGCCGGGTATCAAATCCCATCTATAGACCTCATGGAGCAGGCAACATGCCAACAGTTCCATCTTCTTCAGCGCCAACCCCACATGGCCAAACTCAAACTGTGGTTGTAGAGAATCCGATGTCTTTTGATGAAAGTGGTAAATTGGTTAGTAATGTTGTTGTTGGTGTAACTACAGAAAAGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29251.p1 GENE.R_Transcript_29251~~R_Transcript_29251.p1 ORF type:complete len:182 (+),score=18.54,zf-LSD1|PF06943.8|3.4e-13,zf-LSD1|PF06943.8|1.9e-09,zf-LSD1|PF06943.8|4.9e-13 R_Transcript_29251:382-927(+)
MQNQLLCSGCRTILLYPRGAANVRCAVCNTITPVHPTGLEMDRIICGCCHTLLMYSRGATSVRCLCCQTVNLTSTNASPAQNQVATVRCGSCQMTLMYPYGAPSVKCAVCHYITNVGTTNSRVSNPIYRPHGAGNMPTVPSSSAPTPHGQTQTVVVENPMSFDESGKLVSNVVVGVTTEKK*

Click here to download the sequence:
Link to NCBI Protein BLAST