Transcript Information: R_Transcript_292667.p1


Annotated TAIR IDAT5G21274.1
Annotated Gene Namecalmodulin 6
Annotated Gene Symbol(s)CAM6, ACAM-6
Annotation TypeHomolog
Chromosome Positionchr5:7214740-7215950 | Reverse length=149
E-Value6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36968022186772
Replicate 20.26577595463668
Replicate 30.63790914824728
Condition 2: 8 Hour
Replicate 10.18596859453604
Replicate 20.05660982744604
Replicate 30.045953444608575
Condition 3: 24 Hour
Replicate 10.34872618573728
Replicate 20.11167219691432
Replicate 30.33247146359844


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_292667.p1 GENE.R_Transcript_292667~~R_Transcript_292667.p1 ORF type:5prime_partial len:395 (+),score=87.77,EFhand_Ca_insen|PF08726.6|2.2e-11,Spectrin|PF00435.17|8.1e+02,Spectrin|PF00435.17|0.00016,Spectrin|PF00435.17|0.00018,Spectrin|PF00435.17|6.1e+03,EF-hand_6|PF13405.2|6.5e-07,EF-hand_6|PF13405.2|7.3e+03,EF-hand_1|PF00036.28|3.4e-06,EF-hand_1|PF00036.28|3.8e+03 R_Transcript_292667:2-1186(+)
AAAGTTTTCGTTAAGAACGCTCTTGATGATCTCGAGCAATCTCTTGCTCTGAAACAAAAGGCTGCTGAAGCTATCAAAGAATGGGAACAACAACAAAAATTGGAAGATCTTAAGATTGACTTTGCTAAGAAAGCTGGTGCTCTTAACGTCTTCTTAGAAAATGCCAACGATGTCTTGACTGAACCTATCTCTGTTAATTCTGTTGAAGCTGTTGACGAACTTATTGGTGCTTATGAGTCAGTCAACTCCGAATACTCTTCTCGACAATCTGAAAAAGATGCTCTCGTCGCCTTTAACCAACAATTGGTTGATGTTGGTATCACTGAAAACCCCAACTCAGAACTTACTGCCGACGAAGCTTCAACAAGATTCCAAAATATTGGTGAATTACTTGGAAACAGAAAATCTGCCCTCTCTGCTGAAAAAGAAAAACAAACTTCCAATGAATCTTTACGAGTTGAATTTGCTTCTACTGCTTCATCTGCCAGCAACTACATTGACGAGAACGTATCTAAACTCCAAACTTCTGAAGGTCCAGTTGAAGAACAACTTGCTGCTTTAGATGCACAAAAAATTGATCGCAGCCTTGTTGATAGCGCCAAATCAATTGCTGAGAAACTTAGAGCAGCTGGTGTTCGAAACAACAAACACACCAATCTTTCAATTGAAGACTTGGAAGCTAAATGGAACTCGCTTTCCACTGCTGCTGCTGAAAAGAGAAAACTCCTCGAAAGCGAACTCCTCGCTAAACAACATGGTCAAGTTCCTCCTGAACAATTGAAAGAAATCAATGAATGCTTTGCTCAATTCGATAAAGATTCCTCCGGATTCCTTTCACCACACGAATTTAAAGCTTGTTTATCCGCTCTTGGTGAAGCCATTTCTGAAGATAACCTCCACGTTGTTACTAAGGCCTACGGTGACGCTGAGGGACGTGTTTCTAAAGAAAAATTCACTGAATTCATGATTGCCCGATTATCTGATACTGATACTGCTGACCAAATTGTTAACTCATTCAAAGTTTTAGCTGGAAACCAAGACTTTGTCACCGAACAACAACTCCGAATTGCCTTTGGTTCTGATCAAGATGCTCTCAACTATTTACTCGCTAATTTACCTCCTAAAGAAGGTGTTCAAGGTGGTTATGATTTCACTAAATTCACCCACGATGCTTTCTCTCGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_292667.p1 GENE.R_Transcript_292667~~R_Transcript_292667.p1 ORF type:5prime_partial len:395 (+),score=87.77,EFhand_Ca_insen|PF08726.6|2.2e-11,Spectrin|PF00435.17|8.1e+02,Spectrin|PF00435.17|0.00016,Spectrin|PF00435.17|0.00018,Spectrin|PF00435.17|6.1e+03,EF-hand_6|PF13405.2|6.5e-07,EF-hand_6|PF13405.2|7.3e+03,EF-hand_1|PF00036.28|3.4e-06,EF-hand_1|PF00036.28|3.8e+03 R_Transcript_292667:2-1186(+)
KVFVKNALDDLEQSLALKQKAAEAIKEWEQQQKLEDLKIDFAKKAGALNVFLENANDVLTEPISVNSVEAVDELIGAYESVNSEYSSRQSEKDALVAFNQQLVDVGITENPNSELTADEASTRFQNIGELLGNRKSALSAEKEKQTSNESLRVEFASTASSASNYIDENVSKLQTSEGPVEEQLAALDAQKIDRSLVDSAKSIAEKLRAAGVRNNKHTNLSIEDLEAKWNSLSTAAAEKRKLLESELLAKQHGQVPPEQLKEINECFAQFDKDSSGFLSPHEFKACLSALGEAISEDNLHVVTKAYGDAEGRVSKEKFTEFMIARLSDTDTADQIVNSFKVLAGNQDFVTEQQLRIAFGSDQDALNYLLANLPPKEGVQGGYDFTKFTHDAFSR*

Click here to download the sequence:
Link to NCBI Protein BLAST