Transcript Information: R_Transcript_293174.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36999245178484
Replicate 20
Replicate 30.30955050805611
Condition 2: 8 Hour
Replicate 10.16544503342733
Replicate 20.60434815786988
Replicate 30.49058407082127
Condition 3: 24 Hour
Replicate 10.31024063821222
Replicate 20.29804403906186
Replicate 30.29577979306618


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_293174.p1 GENE.R_Transcript_293174~~R_Transcript_293174.p1 ORF type:internal len:148 (+),score=22.19 R_Transcript_293174:3-443(+)
GGTATCAGAGCTATTTCTACAATCATGACTTCCAAGATAGACATTGAGAAGTTCGATGACAAGATTAGTTTTGCCATGTGGCAAATACAAATGAAAGCCGCGCTCACTCTTCCAGGCTTGGTACCCTTGAATTTTTTGGGTTGTCACTACTCTGTTCAAGGTGTTGTTCTTAAAGTGTCTAAGGGTGTACTTATTTTAATGAAAGGCTCTAGAGTTGGGTGTTTGTATATTTTGCAAGGTTCTACCATCACAGGTTCCGCTACCGTTGCTTCCACATCAAATTTCCAAGTGCAAGCATCTTCAAGCTCTACTACTCTATCTATTCAACCTTCAATAGCTTGTTATCATGGGAAAAGAGCTCGCAAGGTACCAGAGAGATTAAAGGACCGTGATCGTGATATTGTGGCCTATGCATACACCGTTGAAGATCGTGAAGTTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_293174.p1 GENE.R_Transcript_293174~~R_Transcript_293174.p1 ORF type:internal len:148 (+),score=22.19 R_Transcript_293174:3-443(+)
GIRAISTIMTSKIDIEKFDDKISFAMWQIQMKAALTLPGLVPLNFLGCHYSVQGVVLKVSKGVLILMKGSRVGCLYILQGSTITGSATVASTSNFQVQASSSSTTLSIQPSIACYHGKRARKVPERLKDRDRDIVAYAYTVEDREVV

Click here to download the sequence:
Link to NCBI Protein BLAST