Transcript Information: R_Transcript_293426.p1


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value4E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.10754336899602
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.085218829203695
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.10275917693379


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_293426.p1 GENE.R_Transcript_293426~~R_Transcript_293426.p1 ORF type:3prime_partial len:213 (-),score=31.29,Plant_tran|PF04827.10|5.1e-86,DDE_Tnp_4|PF13359.2|1.1e-10 R_Transcript_293426:2-637(-)
ATGATGAGCAGTATTGACTGTATGCATTGGGAGTGGAAAAATTGTCCTCGTGCTTGGAGACGACAATTCCAAGGCAGAAATAAGAAGGCGACACTTATCCTCGAAGCTGTTGCCTCACGTGACCTTTCGATTTGGCATGCCTTCTTCGGAATGCGGGGTTCTTGTAATGATATCAATGTTCTAGATCGATCTCCAGTGTTTGATGACATCTTGAATGGTATAGCGCCCCCTGTTTCATACGTTGTAAATGGCAATGAAAACCATATGGGGTACTATCTTACCGATGGTATATATCCAAAATGGGCAGCTTTTATGCCATCTATTGTTGCTCCACATACGGCTAAGCATAGGCTATTTGCTGAACATCAAGAAGGTGCAAGAAAAGACTTAAAGCGTGCTTTTGGTGTTTTACAAGCTCGTTTTGCAATTCTCCGCCAACCATCTCTTGCATGGGATAAAGATGTCTTGGGAAATATAATGAAAGCATGCATCATTATGGACAATATGATCGTGGAAGACAAACGGGATGCAAATCCTGACCATGGTAATACAGAAGAATTCGATGAAGATAATCGGCAATTTCAACCGTCCACCAGTGATGTAAACATGGATGATGGTAGTTCCACTAGTCACTCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_293426.p1 GENE.R_Transcript_293426~~R_Transcript_293426.p1 ORF type:3prime_partial len:213 (-),score=31.29,Plant_tran|PF04827.10|5.1e-86,DDE_Tnp_4|PF13359.2|1.1e-10 R_Transcript_293426:2-637(-)
MMSSIDCMHWEWKNCPRAWRRQFQGRNKKATLILEAVASRDLSIWHAFFGMRGSCNDINVLDRSPVFDDILNGIAPPVSYVVNGNENHMGYYLTDGIYPKWAAFMPSIVAPHTAKHRLFAEHQEGARKDLKRAFGVLQARFAILRQPSLAWDKDVLGNIMKACIIMDNMIVEDKRDANPDHGNTEEFDEDNRQFQPSTSDVNMDDGSSTSHS

Click here to download the sequence:
Link to NCBI Protein BLAST