Transcript Information: R_Transcript_293809.p1


Annotated TAIR IDAT1G03510.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:876258-877547 | Reverse length=429
E-Value1.7E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1110497972438
Replicate 20
Replicate 30.19918902257524
Condition 2: 8 Hour
Replicate 10.21292056475865
Replicate 20.19444245079292
Replicate 30.31568018470238
Condition 3: 24 Hour
Replicate 10.19963310632786
Replicate 20.19178485991806
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_293809.p1 GENE.R_Transcript_293809~~R_Transcript_293809.p1 ORF type:5prime_partial len:115 (+),score=20.19,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|0.052,PPR|PF01535.16|0.052,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|0.96,PPR_2|PF13041.2|13,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|1.1,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.17 R_Transcript_293809:2-346(+)
GTTTGGAGTAGCTTGATTTCAGCCTATGCTCTTCATGGAGAGGCAAGGTCTGCAGTAGAGATATTTCGTGACATGGAATGCGCGAAAGTGAAGGCTGATGGGATCACTTTCTTGGGTGTGCTTAAAGCCTGTAGTCATGCAGGATTAGCTGATGAAGCGAAGGAATACATTGCTAGGATGCAAGTGACATATGGTGTGGAAGTAACTGGTGATCACTACTCTTGTTTGGTAGATGTACTAAGTAGAGCAGGGCGATTATATGAAGCATATGATGTATTAACAAAAAGTCCTGTAATGGCAACTGCAAAAGCTTGGGGTGCCCTCTTAGGGGCGTTCAGAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_293809.p1 GENE.R_Transcript_293809~~R_Transcript_293809.p1 ORF type:5prime_partial len:115 (+),score=20.19,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|0.052,PPR|PF01535.16|0.052,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|0.96,PPR_2|PF13041.2|13,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|1.1,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.17 R_Transcript_293809:2-346(+)
VWSSLISAYALHGEARSAVEIFRDMECAKVKADGITFLGVLKACSHAGLADEAKEYIARMQVTYGVEVTGDHYSCLVDVLSRAGRLYEAYDVLTKSPVMATAKAWGALLGAFRT*

Click here to download the sequence:
Link to NCBI Protein BLAST