Transcript Information: R_Transcript_29407.p1


Annotated TAIR IDAT1G75660.1
Annotated Gene Name5'-3' exoribonuclease 3
Annotated Gene Symbol(s)XRN3, AtXRN3
Annotation TypeOrtholog
Chromosome Positionchr1:28408289-28414825 | Forward length=1020
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.994590531315
Replicate 213.748746764648
Replicate 316.756846398682
Condition 2: 8 Hour
Replicate 130.120591586181
Replicate 238.132729276409
Replicate 343.349917599484
Condition 3: 24 Hour
Replicate 121.991388775649
Replicate 217.516290737231
Replicate 324.610870938869


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29407.p1 GENE.R_Transcript_29407~~R_Transcript_29407.p1 ORF type:complete len:1069 (+),score=232.59,XRN_N|PF03159.14|4e-99 R_Transcript_29407:360-3566(+)
ATGGGAGTTCCGGCCTTTTACCGGTGGTTAGCGGAGAAGTATCCGTTGATAGTGGTGGATGTTATTGAAGAAGAACCAGTTGATATTGACGGGATTAAGATTCCCGTTGATACTAGTAAACCTAACCCTAATAAGCTTGAGTATGATAATTTATATCTTGATATGAATGGTATCATTCATCCTTGCTTTCATCCTGAGGACCGGCCTTCTCCAACAACATTTGATGAGGTTTTTCAGAATGTTTTCGACTACATTGATAGGCTATTTAATATGGTTCGTCCACGAAAACTGCTGTACATGGCGATTGATGGTGTTGCTCCCAGAGCCAAGATGAACCAGCAGCGTTCTAGGCGTTTCAGGGCTGCTAAAGATGCTGCAGATGCTGCAGCTGAGGAAGAACGGTTGCGACAGGAGTTTGAACAAGAGGGTAGAAAGCTTCCTCCTAAGGAGTCTTCTCAAACATTTGATTCCAATGTTATTACTCCTGGAACGGAGTTCATGGCTGTATTGTCGGTTGCATTACAGTATTATGTTCACCTTAGAATAAATAATGACCCAGGGTGGAAATCGATTAAGGTAATCTTATCTGATGCAAATGTTCCCGGTGAGGGGGAACACAAGATAATGTCATACATTCGTCTTCAAAGAAATCTTCCTGGTCATGATCCGAATACTCGACATTGCCTATATGGATTGGATGCAGATTTGATAATGTTGGCCTTGGCTACTCATGAAGTTCATTTTTCGATCCTCAGAGAGGTTGTATTCACCCCTGGACAGCAAGACAAGTGCTTCCTGTGTGGTCAGGTAGGGCATTTAGCAGCAAACTGTGAAGGGAAGGCTAAGAGGAAATCTGGGGAATTTGATGAAAAAAGTGATGATGCTGCTGTGACCAAAAAGCCATTTCAGTTCCTCAATGTCTGGACTTTAAGGGAATATCTGGAATATGAGTTGAAGATTCCAAATCCACCTTTTAAGATTGATTTAGAGTGCATCATAGATGATTTCATCTTCATATGCTTCTTTGTCGGAAATGATTTTTTGCCCCACATGCCTACCTTGGAAATTCGGGAGGGTGCAATTAACTTGTTGATGGCTGTCTACAAGAAGGAATTTCGTGCAATAGGTGGATACTTGACTGATGGAAGCAAGCCTAACTTGAGCCGGGTAGAGCAATTCATACAAGCTGTTGGTTCGTATGAGGACCAAATCTTTCAGAAAAGAGCTCGCTTACACCAGCGGCAGGCCGATAGAATAAAGCGCGAACGAGGACAGTTGAAAAGAGGGGATGATGCTCAACCTCAAGTTGAACCTGAATCATTGGTTCCGGTATCACGATTTCATGGTTCTCGCCTTGCTTCTGCCTCGGCACCTTCACCATTTCAAAAATCCAACGTTAAAGCTGATTCATCTGCCCGGGCTCAAAAAGTTGCACGTTTGTCTTCGTCAGCAACAATTGGTGCTGCTATTGTTGATGCTGAGAATACTCTTGAGATGGATGCAAATGAAAACAAGGAGGAGTTGAAAGCAAAGCTTAAAGAGTCTCTTCGTGAGAAGTCGGATTTATTTAACTCTGATGATCGGGAAGAGGACAAGATCAAATTAGGAGAGCCTGGGTGGAAAGAAAGATACTATGAAGAGAAGTTTTCTGCAAAGTCTCTTGAGGAGATGGAAAGCATACGAAAGGATGTTGTGTTGAAATACACTGAAGGCTTGTGTTGGGTTATGCATTATTACTACGAAGGTGTCTCCTCATGGCAGTGGTTTTATCCATATCATTATGCTCCTTTTGCTTCTGATATCAAGGATATTGCTCAATTAGATATCAGCTTTGAGCTAGGTTCTCCATTCAAACCATTTGATCAACTTATGGGTGTTTTTCCTGCTGCAAGTTCCCATGCACTTCCACAGCATTATAGGAAATTGATGACTGAACCTGACTCCCAGATTATTGATTTTTACCCAACAGATTTTGAAGTGGACATGAATGGGAAACGGTATTCTTGGCAGGGTATTGCCAAATTGCCTTTTATTGATGAAACCCGTCTTCTTTGTGAGATTGCAAAAGTTGAACATACACTAACGCCAGAAGAAAAGCGAAGGAACAGTATCATGTCTGACATGCTGTTTGTTGCTGTGTCTCATTCACTATCACCATATATCTTTTCCCTTGACGATCGTTGTAAGCAAATGACTGAGGAAGAGCGGGCTCTAGTCAAAGAGAAACTTGATCCGAAGGCCAGGTCTGCTTGCAGCGGGGGGATGAATGGTTATATATGCCTTTGTGCAGGAGACCCTTGTCCTCCTATTTTTAGGGCCCCTGTTGCTGGAATGGAAGATATCGTAGACAATCAAGTCATATGTGCAATTTACAAACTGCCTGACTATCATAAGCACATAACAAGACCTCCACCAGGTGTCAGATTCCCAGAAAAGATTGTCTCGATGGGAGATCTGAAGGAATCTGTTTTGTGGCATGAGGATTCTGGAAGAAGGCATATGGACAATGGAAGAAGGCATATGGAAAATGGAAGACGCCCTATGGATAATGGAAGGCCAAACCCCCCTGGAAGTATATCTGGTCGTCAGCTTGGGGAGGCTGCACATCGTCTAGTTGTTAATAGCTTACAGATGAGGTCAGACCAGAATGGATATGTTTCTCAGGTGCATGCCACCATGTCTGCTGCTTATGGCCCTCCTGGGTATGGACCTGTCGTTCCATATCCAGATAATCGATACCATGGTCAGGATTATGGTACTATGATGGCTTCACAAGGAGGCTACCCAGTTGGGCATCAGCCTCCGCCCATACCACCAAACCGCCGTAATCCGTCATACACTGGTCCTGCTACCCAACATCAGTATGGTAGACCAGGTTCTCAGGATCATAGAAGTAGTCATCCCACTCCAAGTGGTGTGGCCCCAATGCAGGGGTACTATCTCCCAGGACCTCGCCAAAATGGACCTCGTTACCCTCCTGGGCCAGCAGCTGTTCCTGGAGCATACCATGGTCAAAGCGGTTATAGTGGTCAACAGAGATACCAGAGCTATGGTGTTGGCGGCTATAGTCAGTGGGGTGCAGGCCCCCAGTCTAACAATGTCGCTAGAGGATACAATAATAGCTCGCAACAAGGGGGAAACCGGTTTTCATCATTGGACAGAGGATCAAATCGAAGGCCACCACCACCAAGTCATGGCCGTCGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29407.p1 GENE.R_Transcript_29407~~R_Transcript_29407.p1 ORF type:complete len:1069 (+),score=232.59,XRN_N|PF03159.14|4e-99 R_Transcript_29407:360-3566(+)
MGVPAFYRWLAEKYPLIVVDVIEEEPVDIDGIKIPVDTSKPNPNKLEYDNLYLDMNGIIHPCFHPEDRPSPTTFDEVFQNVFDYIDRLFNMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLRQEFEQEGRKLPPKESSQTFDSNVITPGTEFMAVLSVALQYYVHLRINNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGHDPNTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKSGEFDEKSDDAAVTKKPFQFLNVWTLREYLEYELKIPNPPFKIDLECIIDDFIFICFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFRAIGGYLTDGSKPNLSRVEQFIQAVGSYEDQIFQKRARLHQRQADRIKRERGQLKRGDDAQPQVEPESLVPVSRFHGSRLASASAPSPFQKSNVKADSSARAQKVARLSSSATIGAAIVDAENTLEMDANENKEELKAKLKESLREKSDLFNSDDREEDKIKLGEPGWKERYYEEKFSAKSLEEMESIRKDVVLKYTEGLCWVMHYYYEGVSSWQWFYPYHYAPFASDIKDIAQLDISFELGSPFKPFDQLMGVFPAASSHALPQHYRKLMTEPDSQIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLCEIAKVEHTLTPEEKRRNSIMSDMLFVAVSHSLSPYIFSLDDRCKQMTEEERALVKEKLDPKARSACSGGMNGYICLCAGDPCPPIFRAPVAGMEDIVDNQVICAIYKLPDYHKHITRPPPGVRFPEKIVSMGDLKESVLWHEDSGRRHMDNGRRHMENGRRPMDNGRPNPPGSISGRQLGEAAHRLVVNSLQMRSDQNGYVSQVHATMSAAYGPPGYGPVVPYPDNRYHGQDYGTMMASQGGYPVGHQPPPIPPNRRNPSYTGPATQHQYGRPGSQDHRSSHPTPSGVAPMQGYYLPGPRQNGPRYPPGPAAVPGAYHGQSGYSGQQRYQSYGVGGYSQWGAGPQSNNVARGYNNSSQQGGNRFSSLDRGSNRRPPPPSHGRR*

Click here to download the sequence:
Link to NCBI Protein BLAST