Transcript Information: R_Transcript_294279.p1


Annotated TAIR IDAT4G25000.1
Annotated Gene Namealpha-amylase-like
Annotated Gene Symbol(s)ATAMY1, AMY1
Annotation TypeOrtholog
Chromosome Positionchr4:12852109-12853825 | Reverse length=423
E-Value2.1E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13421294819646
Replicate 20.46315368565363
Replicate 30.67372757635742
Condition 2: 8 Hour
Replicate 10.1800431246121
Replicate 20
Replicate 30.66733862574952
Condition 3: 24 Hour
Replicate 10
Replicate 20.32434204250849
Replicate 30.64375602020286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_294279.p1 GENE.R_Transcript_294279~~R_Transcript_294279.p1 ORF type:5prime_partial len:136 (+),score=21.41,Alpha-amyl_C2|PF07821.8|8.9e-18 R_Transcript_294279:3-410(+)
CCCAGTGGAATGATAGGAGTTATGCCTAAGAATGCTGTTACTTTTATTGATAACCATGATACAGGTTCTACTCAGAAGTTATGGCCATTTCCATCTGATAAAGTTATGCTTGGATATGCCTACATTCTTACCCATCCAGGAATTCCTTCAATATTTTATGATCACTTTATAGAATGGGGATTGAAAGAGGAGATAGTGAAGTTAGCTTCAATGAGGGCAAGAAAAGGAATAAGTGAATCAAGTACAGTAAATATAATGGTTTCAGATGCAGACTTATATCTTGCAATGATTGATGGGAAAATCATAGTCAAACTTGGGCCAAGATATGATATTGGCAATCTTGTTCCTTCAACATTTAAGCTCGCATTATTTGGAAAAGACTATTGCATTTGGGAGAAGCGAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_294279.p1 GENE.R_Transcript_294279~~R_Transcript_294279.p1 ORF type:5prime_partial len:136 (+),score=21.41,Alpha-amyl_C2|PF07821.8|8.9e-18 R_Transcript_294279:3-410(+)
PSGMIGVMPKNAVTFIDNHDTGSTQKLWPFPSDKVMLGYAYILTHPGIPSIFYDHFIEWGLKEEIVKLASMRARKGISESSTVNIMVSDADLYLAMIDGKIIVKLGPRYDIGNLVPSTFKLALFGKDYCIWEKRA*

Click here to download the sequence:
Link to NCBI Protein BLAST