Transcript Information: R_Transcript_294368.p1


Annotated TAIR IDAT5G18180.1
Annotated Gene NameH/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6008561-6009605 | Reverse length=189
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1798321276327
Replicate 20.10343005131181
Replicate 31.0155696471201
Condition 2: 8 Hour
Replicate 10
Replicate 20.22030425459296
Replicate 30.44708400542825
Condition 3: 24 Hour
Replicate 10.11309264644189
Replicate 20.10864659552009
Replicate 30.75474843747922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_294368.p1 GENE.R_Transcript_294368~~R_Transcript_294368.p1 ORF type:5prime_partial len:203 (+),score=51.13,Gar1|PF04410.10|1.4e-30 R_Transcript_294368:1-609(+)
GCTATGTCATATTCCCCAAGAGGTTCGCCAAGAGGAGGTAGAGGTGGAGGAAGAGGTGGTGGTTTTAATAGAGCCCCCGAAATCCCTGATAGTGTTATTGAGGCTGGTGAATTTCTTCACCCGTGTAAAGATGAAATAATTATAAAATCAAATGATGCATCTAGAGTACCAAAATTTGGTTCCTCTATTTTCTTAAAGAACAAAACACCAATTGGTAAAATTGACGAAGTTTTTGGCCCAATCAATCAAATTTATTTCTCTGTTAAACCTTCAGAAGGATTTCAATCAAGCTCTTGGAAACCTGGAGAATTATTTTACATTGCCCCCCAAAGTCTTTTATTTGCCGATAGTTTCACCAAGAAACCAGATGCAAAGCCTTCTACTCCAGGCAGTAAGAAAGGAGGTGCTGGTAGAGGTGGAAGAGGAGGTGCTCGTGGTGGACGTGGAGGAAGAGGTGGTTTTGGTGGCGGATCTCCAAGAGGTGGCCGAGGTGGTTTTGGTGGCCGAGGTGGTAGTGGATCTCCTAGAGGTGGACGTGGTGGATCTCCAAGAGGTGGTTTTGGCGGACGAGGTGGTGGATCTCCAAGAGGTGGACGAGGAAGATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_294368.p1 GENE.R_Transcript_294368~~R_Transcript_294368.p1 ORF type:5prime_partial len:203 (+),score=51.13,Gar1|PF04410.10|1.4e-30 R_Transcript_294368:1-609(+)
AMSYSPRGSPRGGRGGGRGGGFNRAPEIPDSVIEAGEFLHPCKDEIIIKSNDASRVPKFGSSIFLKNKTPIGKIDEVFGPINQIYFSVKPSEGFQSSSWKPGELFYIAPQSLLFADSFTKKPDAKPSTPGSKKGGAGRGGRGGARGGRGGRGGFGGGSPRGGRGGFGGRGGSGSPRGGRGGSPRGGFGGRGGGSPRGGRGRF*

Click here to download the sequence:
Link to NCBI Protein BLAST