Transcript Information: R_Transcript_294893.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16900889772888
Replicate 20
Replicate 30.63629826655979
Condition 2: 8 Hour
Replicate 10.68016291520126
Replicate 20.4140904044664
Replicate 30
Condition 3: 24 Hour
Replicate 10.63771686743623
Replicate 20.61264608029381
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_294893.p1 GENE.R_Transcript_294893~~R_Transcript_294893.p1 ORF type:5prime_partial len:108 (-),score=6.86,zf-RVT|PF13966.2|3.5e-18 R_Transcript_294893:34-357(-)
TTAGCGGGTTTGATTTGGAAGGCGAAGGCACCTCTTAAGGTGCGGGGATTTATCTGGACACTTGCTTTGAACAGGATCAACACTAACGACATGCTGCAACGTAGGCGACCGGGGTGGTGTCTATCTCCGGATGTCTGTGTGATGTGTGGGGTTAGTGCGGAGTCAGCCCCTCATCTATTTTTGCATTGCAAGCTGGCAAGGGCTCTTTGGGGTAAGCTGTTTGGTGTGAAAGGGGAATTGATGGTGTGTCCTGCGATGGTCCTCGAATTTTTACAGATTTGTCATGTGGGTTTCGGGATGGATAAAGAGATGCGGATCCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_294893.p1 GENE.R_Transcript_294893~~R_Transcript_294893.p1 ORF type:5prime_partial len:108 (-),score=6.86,zf-RVT|PF13966.2|3.5e-18 R_Transcript_294893:34-357(-)
LAGLIWKAKAPLKVRGFIWTLALNRINTNDMLQRRRPGWCLSPDVCVMCGVSAESAPHLFLHCKLARALWGKLFGVKGELMVCPAMVLEFLQICHVGFGMDKEMRIL*

Click here to download the sequence:
Link to NCBI Protein BLAST