Transcript Information: R_Transcript_295156.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10550844482496
Replicate 20.48546359344042
Replicate 30.92686221487322
Condition 2: 8 Hour
Replicate 10.28307358320515
Replicate 20.77552191356713
Replicate 30.31476781422636
Condition 3: 24 Hour
Replicate 10.66352044010706
Replicate 20.12748704561027
Replicate 30.63259262100859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_295156.p1 GENE.R_Transcript_295156~~R_Transcript_295156.p1 ORF type:3prime_partial len:173 (+),score=20.25 R_Transcript_295156:709-1224(+)
ATGAATGATAAGGAGAACCTGGCACATAAAGTCCTTAAGAGCAAGTATGTACTCCACAGGAATGGTGCGGCTAATTTTAATAATGGTTCTTTCATTTGGCAAGACCTAGGAAAAGGTTGGACTCAATTTCATGAGAACATTTACTGGATCATTGGAAAGGGGGACCACATTTCTTTGTGGGAGGATAATTGGTGTAAATTGGGGCCCTTGAGAAGTTTTATCCATGGTCCTCTTCATAGGCAAGAAGAAGCCCTCAAAGTCAAGGACTGCATCTCAAACTGGCATTGGGATTTCTCTTGTAATTCCTTTGTGCTCCCTGATCATATTCTAAACCTTCTGACTGCCATTCCCTTCTCCCCTGATCAGAGAGATTTTCCTACTTCACTCCTTGAAAAAAATAACAAATTTGATTCAAAAAAACTTATCTTGACACTTATACCCAAGGTTTTGATGATGACAATTGTTTGTGGATTTGGAATTGCCCCACGTCCCCAAAAATTTCTTTTTTCATCTGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_295156.p1 GENE.R_Transcript_295156~~R_Transcript_295156.p1 ORF type:3prime_partial len:173 (+),score=20.25 R_Transcript_295156:709-1224(+)
MNDKENLAHKVLKSKYVLHRNGAANFNNGSFIWQDLGKGWTQFHENIYWIIGKGDHISLWEDNWCKLGPLRSFIHGPLHRQEEALKVKDCISNWHWDFSCNSFVLPDHILNLLTAIPFSPDQRDFPTSLLEKNNKFDSKKLILTLIPKVLMMTIVCGFGIAPRPQKFLFSSG

Click here to download the sequence:
Link to NCBI Protein BLAST