Transcript Information: R_Transcript_29521.p1


Annotated TAIR IDAT3G23530.1
Annotated Gene NameCyclopropane-fatty-acyl-phospholipid synthase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8437472-8442597 | Forward length=867
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.064318015372
Replicate 224.406989769637
Replicate 323.645664615383
Condition 2: 8 Hour
Replicate 120.70578902221
Replicate 220.634869072338
Replicate 325.449896457386
Condition 3: 24 Hour
Replicate 143.244256701954
Replicate 241.69663575972
Replicate 333.890639515196


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29521.p1 GENE.R_Transcript_29521~~R_Transcript_29521.p1 ORF type:complete len:868 (+),score=134.36,CMAS|PF02353.16|2.5e-82,Amino_oxidase|PF01593.20|6.2e-22,Amino_oxidase|PF01593.20|2.5e+03,NAD_binding_8|PF13450.2|6.6e-17,Methyltransf_18|PF12847.3|7.1e-13,Methyltransf_11|PF08241.8|2.2e-11,Methyltransf_31|PF13847.2|1.5e-11,Methyltransf_12|PF08242.8|2e-11,Methyltransf_23|PF13489.2|1.5e+03,Methyltransf_23|PF13489.2|4.7e-10,DAO|PF01266.20|6.1e-08,DAO|PF01266.20|3e+02,MTS|PF05175.10|6.6e+03,MTS|PF05175.10|1.4e-06,FAD_binding_2|PF00890.20|6.5e-07,Methyltransf_25|PF13649.2|1.5e-06,FAD_oxidored|PF12831.3|3.1e-06,NodS|PF05401.7|4.1e-06 R_Transcript_29521:226-2829(+)
ATGAGAGTGGCAGTGGTTGGTGGAGGGATAAGTGGATTAGGGGCAGCATACGAGCTTGCAAAAGCAGGGGTACAAGTTGTGTTGTATGAGAAGGAACATTACTTAGGTGGCCACTCCAAGACCGTTCATTTTGAGGGTCTTGATTTGGACCTTGGCTTCATGGTCTTCAATCGGGTTACATATCCGAATATGATGGAGCTCTTTGAAATTCTTGGTGTTGAGATGGAGTGCTCTGATATGTCATTCTCAGTAAGTCTAGACAATGGACAAGGATGTGAGTGGGGAAGCCGAAATGGAATAAGAGGCTTGTTTGCACAGAAGAGTAATTCATTAAACCCGTATTTCTGGAAAATGATTCAAGAAATAGTTAAGTTCAAAGATGATGTGATAATGTACCTTGAGGAGCTTGAAAACAACCCAGACATGAACCGAATGGAAACTCTTGGCCATTTTATCAAGTCAAGAGGTTACTCTGATTTGTTTCAGAAGGCTTACCTGGTTCCCATGTGTGCTTCAATCTGGTCTTGCCCTTCAGAAACAGTGATGAACTTTTCTGCATTTTCAATCCTTTCCTTTTGTCGCAACCATCACCTTCTTCAGTTATTTGGACGTCCACAATGGCTTACTGTGAAAGGACGCTCGCATTGTTATGTGAATAAGATTAGAGAGGAGATTGAAAATAGAGGAGGTCTAGTTAAAACAAGTTGTGAGGTACACTCAGTTTCAACAAGTGAAGAGGGTTGTGCATTATCTTTCGGTGATGGATCACAGGATGTATATGATGGATGCATTATAGCTGCTCATGCCCCAGATGCCATAAGAATATTGGGAGAAGAAGCAACATCTGATGAAAGAAGCATACTAGGTGCTTTCCAATATGTCTATAGTGATATATTCCTTCATCATGATAAAAGTTTCATGCCTAACAACTCAGCAGCATGGAGTGCATGGAATTTTCTGGGGAGCACAGACAGTAAAGTGTGTTTGACATACTGGCTAAATGTATTGCAGAATATCTGTGAAACAGATACACCTTTCCTAGTGACTCTTAATCCACCTCATACACCAGAAAACTTATTGCTCAAATGGACTACTGGTCATCCTGTGCCCTCCGTTGCAGCAACAAAGGCTTCACTTGAGCTCACTCGCATTCAGGGAACAAGAGGAATTTGGTTTTGTGGAGCATATCAAGGGTATGGCTTCCATGAGGATGGATTGAAGGCTGGCTTGATTGCTGCCCATGGCTTGCTAGGAAGGAGTGTCAACATTCTAACAAACCCAAAACAGATGATGCCTTCTTTGAAAGAAGCAGCTGCTCGCCTTTTTGTAACCAGATTCCTGAGGCGCTTTATTTCTGCTGGTACTTTGATTTTTCTGGAAGAGGGAGGCACAATTCTGACCTTTGAAGGGTCGAGCAAACACTGCACCTTGAAAGTCGCAATAAGAGTTCACAATCCCCATTTTTATTGGAAGGTTGCTACAGAAGCTGACTTAGGTCTTGCAGATGCATTCATTAATGGTGACTTCTCGTTTGTTGACAAGGATGAAGGTCTTCTAAACCTTTTCATGATATTTATTGTCAATAGAGATTTAAACTCTTCTGCTCCCATGATTAAGAAGAGGGGTTGGTGGACACCAATGCTATTTACAGCTGGTATAGCATCTGCAAGATATTTCTATCACCACGTTTCTAGGCAAAACACACTTACACAAGCTCGTCGGAATATTTCTCGCCATTATGACTTGAGTAATGATATGTTCTCCCTCTTTTTGGATGAATCAATGACATATTCCTCTGCTATCTTTGAGTCTGAAGATGAAGACCTAAAAGCTGCGCAAGCTAGAAAAATCTCTCTTCTAATTGAAAAGGCCAGAGTAGAGAAACATCATGAGGTGCTTGAAATTGGTTGTGGTTGGGGTAGCCTTGCTATTGAACTTGTTAAGCGAACTGGATGCAGATACACTGGTATTACTCTTTCAGAAGAGCAATTAAGATTAGCAGAACAGAGAGTAAAAGAGGCTGGCTTACAGGATCGGATAAAGTTTCTTCTCTGTGATTATCGCCAAGTGCCAGGAGTCCACAAATATGATAGAATTATCTCCTGTGAGATGCTAGAAGCTGTTGGGCATGAATTCATGGAGGAGTTTTTTCACTGTTGCGATTCCCTTCTAGCACCTAATGGACTTCTTGTTCTTCAGTTCATATCGATACCTGATGAGCGGTATGAAGAGTACAGAAGAAGCTCAGATTTCATAAAAGAATACATTTTCCCCGGTGGATGTCTACCTTGCTTGAGCAGAGTAACCTCAGCAATGGCTACCGCATCTAGACTTTGTGTGGAGCATGTGGAGAACATTGGAATACACTACTATCAAACTCTAAGATGCTGGCGAAAGAATTTTTTGGAGCACCAGAGTAAAATCCTTTCACTCGGCTTCAATGAGAAGTTCATCAGGACATGGGAATACTATTTTGATTATTGTGCAGCTGGCTTCAGAACACGGACGTTAGGAAATTACCAGATTGTCTTTTCACGGCCTGGAAATATCGCTGCATTCAGTGACCCGTATGCAGCCATACCTTCTACTTATTGCTGCAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29521.p1 GENE.R_Transcript_29521~~R_Transcript_29521.p1 ORF type:complete len:868 (+),score=134.36,CMAS|PF02353.16|2.5e-82,Amino_oxidase|PF01593.20|6.2e-22,Amino_oxidase|PF01593.20|2.5e+03,NAD_binding_8|PF13450.2|6.6e-17,Methyltransf_18|PF12847.3|7.1e-13,Methyltransf_11|PF08241.8|2.2e-11,Methyltransf_31|PF13847.2|1.5e-11,Methyltransf_12|PF08242.8|2e-11,Methyltransf_23|PF13489.2|1.5e+03,Methyltransf_23|PF13489.2|4.7e-10,DAO|PF01266.20|6.1e-08,DAO|PF01266.20|3e+02,MTS|PF05175.10|6.6e+03,MTS|PF05175.10|1.4e-06,FAD_binding_2|PF00890.20|6.5e-07,Methyltransf_25|PF13649.2|1.5e-06,FAD_oxidored|PF12831.3|3.1e-06,NodS|PF05401.7|4.1e-06 R_Transcript_29521:226-2829(+)
MRVAVVGGGISGLGAAYELAKAGVQVVLYEKEHYLGGHSKTVHFEGLDLDLGFMVFNRVTYPNMMELFEILGVEMECSDMSFSVSLDNGQGCEWGSRNGIRGLFAQKSNSLNPYFWKMIQEIVKFKDDVIMYLEELENNPDMNRMETLGHFIKSRGYSDLFQKAYLVPMCASIWSCPSETVMNFSAFSILSFCRNHHLLQLFGRPQWLTVKGRSHCYVNKIREEIENRGGLVKTSCEVHSVSTSEEGCALSFGDGSQDVYDGCIIAAHAPDAIRILGEEATSDERSILGAFQYVYSDIFLHHDKSFMPNNSAAWSAWNFLGSTDSKVCLTYWLNVLQNICETDTPFLVTLNPPHTPENLLLKWTTGHPVPSVAATKASLELTRIQGTRGIWFCGAYQGYGFHEDGLKAGLIAAHGLLGRSVNILTNPKQMMPSLKEAAARLFVTRFLRRFISAGTLIFLEEGGTILTFEGSSKHCTLKVAIRVHNPHFYWKVATEADLGLADAFINGDFSFVDKDEGLLNLFMIFIVNRDLNSSAPMIKKRGWWTPMLFTAGIASARYFYHHVSRQNTLTQARRNISRHYDLSNDMFSLFLDESMTYSSAIFESEDEDLKAAQARKISLLIEKARVEKHHEVLEIGCGWGSLAIELVKRTGCRYTGITLSEEQLRLAEQRVKEAGLQDRIKFLLCDYRQVPGVHKYDRIISCEMLEAVGHEFMEEFFHCCDSLLAPNGLLVLQFISIPDERYEEYRRSSDFIKEYIFPGGCLPCLSRVTSAMATASRLCVEHVENIGIHYYQTLRCWRKNFLEHQSKILSLGFNEKFIRTWEYYFDYCAAGFRTRTLGNYQIVFSRPGNIAAFSDPYAAIPSTYCCR*

Click here to download the sequence:
Link to NCBI Protein BLAST