Transcript Information: R_Transcript_295946.p2


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20836713418629
Replicate 20.04793675894132
Replicate 30.36608941363714
Condition 2: 8 Hour
Replicate 10.27951900624709
Replicate 20.30631344987926
Replicate 30.2072101668994
Condition 3: 24 Hour
Replicate 10.36690559496331
Replicate 20.20141788941166
Replicate 30.34980349956229


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_295946.p2 GENE.R_Transcript_295946~~R_Transcript_295946.p2 ORF type:5prime_partial len:438 (+),score=10.57,RVT_1|PF00078.23|2.1e-28 R_Transcript_295946:2-1315(+)
GGTAAGTTGCGTGAACAACTAGTCAATTTTTTAAGAGCTAATGTCGATTGCTTTGCTTGGTCCCACCAGGACATGGTGGGAATAGATCCTTCCATCGTAACTCACAGGTTGAACGTAGACCCCAGCTACAAGCCTGTGATACAAAAGCGGCGTAAGTTTGCTCCGGAGAGAAATCAAGCGATCAACGATGAGGTCCAGAAACTGCTTGAGACAGGGAAGGTTAGGGAGGTGAAGTACCCCGAATGGCTCTCCAATGTGGTGGTTGTGAAGAAGAACGGGAAGTGGCGAGTCTGCATCGACTTCACCGACCTCAACAAGGCGTGCCCGAAAGACCCGTTCCCATTGCCACATATCGATGCCATGGTAGATGCGACTGCAGGGCACGAGCTGTTAACCTTCATGGACGCCTTTAGCGGGTACAACCAGATACAAATGCACCCCGAGGACCAAGAAAAAACGGCCTTCGTGACAGACAGGGGGATATACTGCTACAAAGTGATGCCCTTCGGGCTGAAGAACGCCGGAGCAACTTACCAAAGGTTAGTAAATAGAATGTTCAAAGACCAGATTGGAGATACGATGGAAGTCTACATAGATGACATGGTTGTCAAGTCCAAGCAAGAAAAACAGCACATCGAGCACCTCGAAAACGCTTTCAAGGTACTCCGTCGATACAACATGAAGCTAAACCCAACAAAGTGCATGTTCGGGATATCGTCTGGGAAGTTCCTAGGCTACATGGTAACACAAAGGGGGATCGAGGCCAGCCCAGAGCAGATCAGAGCACTGCTGAACCTGCGGAAGCCAAGATGCTACAAAGACATCCAGAAGCTGACCGGTAAAGTGGCAGCCCTAAACAGGTTCATATCCAAGTCCTCAGACAAGTGCAGGCCATTCTACGGCATTCTTAGGAAAAATAAATCCTTTGAATGGACCCAACAACACGATGAGGCATTCGACGCCCTTAAGCGGTATCTCTCCAGTCCACCCTTGCTGTCCAAGCCTCTACAGGGAGAAGTCCTTTACATCTACCTTGCTGTATCCGAGTCGTCAATCAGTGCTGTATTAGTCCGAGAAGAGGAAGGGGCTCAACTTCCAGTGTACTACGTAAGTAAAACTCTCCTAGACACCGAGACCAGGTATACCTCCCTTGAAAAACTTATATTAGCATTGTATACGTCTTCTATAAAGCTGCGTCCCTACTTTGAGGGGCACACTATCTGTGTAAGGACTAATTACCCCATCAAGTCTGTTATGAGAAAACCAGAGCTGACAGGTCGGATTGCCAAATGGACCGTCCACCTAGGTGGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_295946.p2 GENE.R_Transcript_295946~~R_Transcript_295946.p2 ORF type:5prime_partial len:438 (+),score=10.57,RVT_1|PF00078.23|2.1e-28 R_Transcript_295946:2-1315(+)
GKLREQLVNFLRANVDCFAWSHQDMVGIDPSIVTHRLNVDPSYKPVIQKRRKFAPERNQAINDEVQKLLETGKVREVKYPEWLSNVVVVKKNGKWRVCIDFTDLNKACPKDPFPLPHIDAMVDATAGHELLTFMDAFSGYNQIQMHPEDQEKTAFVTDRGIYCYKVMPFGLKNAGATYQRLVNRMFKDQIGDTMEVYIDDMVVKSKQEKQHIEHLENAFKVLRRYNMKLNPTKCMFGISSGKFLGYMVTQRGIEASPEQIRALLNLRKPRCYKDIQKLTGKVAALNRFISKSSDKCRPFYGILRKNKSFEWTQQHDEAFDALKRYLSSPPLLSKPLQGEVLYIYLAVSESSISAVLVREEEGAQLPVYYVSKTLLDTETRYTSLEKLILALYTSSIKLRPYFEGHTICVRTNYPIKSVMRKPELTGRIAKWTVHLGG*

Click here to download the sequence:
Link to NCBI Protein BLAST