Transcript Information: R_Transcript_29600.p1


Annotated TAIR IDAT4G29950.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14657464-14660370 | Forward length=828
E-Value2.1E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.334461661432
Replicate 24.5699323759778
Replicate 35.595116075481
Condition 2: 8 Hour
Replicate 14.1451282861116
Replicate 25.0291705229269
Replicate 35.5749807709532
Condition 3: 24 Hour
Replicate 14.691498695867
Replicate 24.0803562397319
Replicate 34.419887161683


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29600.p1 GENE.R_Transcript_29600~~R_Transcript_29600.p1 ORF type:complete len:827 (+),score=186.89,RabGAP-TBC|PF00566.14|3.2e-12,RabGAP-TBC|PF00566.14|3.4e-13 R_Transcript_29600:524-3004(+)
ATGTCACCAGCTGCATTTTTGCCAGAGAAGTTGGATTGTATAAAGGGTCTTAATTATAGTAATAATAATATCAATGATATGGTGATGGATGATCCTCGTTTCCCCGATCTTAGAGGTGTTCGATGGCGGGTCAATCTTGGGGTTCTTCCTTCTTCTTCCATTGATGACCTTCGTCGTGTTACTGCTGATTTTCGTCGAAAATATGCTGGTCTACGGAGGTGCCTTCTCATTGATCCACATGTCCCTAAATTCAGTGATGATTCTCCAGATCTAGAAATAGATAACCCGCTCTCCCAAAATCCAGATAGCACATGGGGCCGCTTTTTCCGAAATGCTGAGTTGGAAAAAATGGTCGACCAAGATTTATCTCGTTTATATCCTGAACACGGGAGCTATTTCCAGACACCAGGATGCCAAGGCTTATTGAGGCGAATTTTGTTATTATGGTGCCTGAGGCATCCAGAGTGTGGCTACAGACAAGGAATGCATGAACTTCTGGCTCCTCTGTTATACGTCCTTCATGCTGACATACAACATCTTAATGAAGTTCGAAAGCGTTATGAAGACCACTTCGTGGACAAGTTTGATGAGGTTTTGTTTCAGGAAAGCCTTGATTTCAGTTTCAAGATATCTTCAAATGCTTTACAAGATGATACTGGCTTTCAAGAGCAGTCTAGAAAGCATACAAGTCTTAGTGATCTTGATGCCAACATACAGAATATTGTTTTACTAACTGATTTATATGGGGCAGAGGGTGAACTTGGCATTGTATTATCTGAGAAGTTTATAGAACATGATGCATATTGTATGTTTGATGCTTTAATGAGTGGGGCTGGTGGTGTTGTGGCCATGGCAGAATTCTTCTCCCACTCATCTGCAAGTGATACCCAAAGTGGTTTAGCCCCTGCTATTGAAGCTTCGTTGGCATTTTACCACTTGCTTTCTGTTGTTGATCCCTCATTGTATAGTCATCTTGTTGAACTGGGTGTTGAACCACAATATTTCGCTCTTCGTTGGTTGCGGGTCCTCTTTGGCCGTGAATTTTCTCTTGAAGACTTGTTGATAATCTGGGATGAGATGTTTTCATTTGATAATAGTAAACCGATTAAAGCTGCTGAACATGATTCGGGGGTATTACATTCTCCAAGGGGAGCATTCATCACTGCCATGGCTGTTTCAATGATGCTCAATGTGAGGTCTTCTCTGCTTGCCACCGAATATGCTGCCGCTTGTCTGCAGAGGCTACTCAATTATCCTGAAAAAGTAGATTTGGACAAACTGATAGGAAAGGCAAAGTCTTTGGTTACTCTTGCACTGGAGACGAATGCTCCTTCCCATTCTACTTCAGTGATTGGGCATGGCAACCACAACAAGCAAATGGGTGGTAAAGGTCATAGTCACAGCATCTCATTTGATTCAAGTTCTCAAGGAACACCATTGAATATTGTACCTGAGAGATATTGGGAAGAAAAATGGAGAGTTATGCACAAGGAAGAGGAAACTAAGAAGGAAAATTTTCCTAAAAACGGATCATCTCGGAGGAAAGGTTGGACAGAGAGAGTGAAGTTGAGATTATCTAGAACAGAATCAGACCCTTCCCCATCAAAAAGAGAACACAAGGTGAGAGATCATAAACCATGTGTTAGGAGAAGCTTGATCGATGATTTGTCCCGGCAGCTTAACTGTGAAGAAGATACTGCAGAAGCTGATCATGACAAATCTTCTACACACAAGGATCCCCTATTGATGGAATCTGATGCAGTGTCTCAAGATGTTGTGCAGGAAAGTGTAGATTATGTAGACAAGATATCTCCAGCCCCAAGTACTGCCAGTGAAGAGCATTCTCCTGTTTTTTCAGACCCACCGACTCCTGTTGAAAATGATTCAGAGAAGAGTAGCGTTGCATCAAATGCATCCCATGATATCGATGATGGAACCCAGAACTCTGGTTCGTTTGAGTCTACAATAGAAAAGCCTCCCCTTCCAATTTCTGATGCTCCAGAAGCAAGTGCTTGTGAAGTATCTGACACTGGCAATAATAGTCCTAGAGAATTACCAGCAGCTGTTCCGAAGGAAAGAAAGACTTTATCTGGTAAACTCCAGTGGTTCTGGAAGGTTGGGCGCCATGCTTCTGGTGAGGGGACTTCTGATAAAAAGTCTGAGGTTGATGACGCAAAATTGGCCAATGGCGGATGTCTTCAAGGGGATAAGGGGGGACATTCTACTGATGAGACGAACTTCAGCCTTGTAAATATCAAAACAGATGGCTGTGACCAGAATTTGATATGTGCATTGAGGAATCTTGGGCAGTCTATGCTGGAAAACATTCAGGTCATCGAGTCATCATTCCAGCAAGAAAAAAGTCAATCTGGCTCGCTCGATCACATTTCAAAGCATGCCCTTGTTGAAAAGGGGCAAGTTAAAGCAATGATGGCCCTGAAGGAGCTTCGGAAAATAAGCAGCCTTCTAAGAGAGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29600.p1 GENE.R_Transcript_29600~~R_Transcript_29600.p1 ORF type:complete len:827 (+),score=186.89,RabGAP-TBC|PF00566.14|3.2e-12,RabGAP-TBC|PF00566.14|3.4e-13 R_Transcript_29600:524-3004(+)
MSPAAFLPEKLDCIKGLNYSNNNINDMVMDDPRFPDLRGVRWRVNLGVLPSSSIDDLRRVTADFRRKYAGLRRCLLIDPHVPKFSDDSPDLEIDNPLSQNPDSTWGRFFRNAELEKMVDQDLSRLYPEHGSYFQTPGCQGLLRRILLLWCLRHPECGYRQGMHELLAPLLYVLHADIQHLNEVRKRYEDHFVDKFDEVLFQESLDFSFKISSNALQDDTGFQEQSRKHTSLSDLDANIQNIVLLTDLYGAEGELGIVLSEKFIEHDAYCMFDALMSGAGGVVAMAEFFSHSSASDTQSGLAPAIEASLAFYHLLSVVDPSLYSHLVELGVEPQYFALRWLRVLFGREFSLEDLLIIWDEMFSFDNSKPIKAAEHDSGVLHSPRGAFITAMAVSMMLNVRSSLLATEYAAACLQRLLNYPEKVDLDKLIGKAKSLVTLALETNAPSHSTSVIGHGNHNKQMGGKGHSHSISFDSSSQGTPLNIVPERYWEEKWRVMHKEEETKKENFPKNGSSRRKGWTERVKLRLSRTESDPSPSKREHKVRDHKPCVRRSLIDDLSRQLNCEEDTAEADHDKSSTHKDPLLMESDAVSQDVVQESVDYVDKISPAPSTASEEHSPVFSDPPTPVENDSEKSSVASNASHDIDDGTQNSGSFESTIEKPPLPISDAPEASACEVSDTGNNSPRELPAAVPKERKTLSGKLQWFWKVGRHASGEGTSDKKSEVDDAKLANGGCLQGDKGGHSTDETNFSLVNIKTDGCDQNLICALRNLGQSMLENIQVIESSFQQEKSQSGSLDHISKHALVEKGQVKAMMALKELRKISSLLREM*

Click here to download the sequence:
Link to NCBI Protein BLAST