Transcript Information: R_Transcript_29615.p1


Annotated TAIR IDAT5G11700.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G32920.3); Has 8203 Blast hits to 3102 proteins in 389 species: Archae - 3; Bacteria - 5624; Metazoa - 852; Fungi - 139; Plants - 704; Viruses - 77; Other Eukaryotes - 804 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3762961-3771123 | Reverse length=1476
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5792690359188
Replicate 25.7302101756403
Replicate 36.9620063955226
Condition 2: 8 Hour
Replicate 16.6319399891574
Replicate 28.6762070824173
Replicate 39.8826825569302
Condition 3: 24 Hour
Replicate 19.0818617151634
Replicate 26.6120176549973
Replicate 38.3870184740971


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29615.p1 GENE.R_Transcript_29615~~R_Transcript_29615.p1 ORF type:complete len:1451 (+),score=309.82 R_Transcript_29615:241-4593(+)
ATGTCCGGAGCATGGAGTGTAAATCTCTGTCAAACAATTTTGGTGGTTATTGTTGTTTTGGTGAATTCGAATAAATTAGGGTTTGGTTTTGATGATGAGGATTATGGATTGTTCTCGATTGTTGAATTGTCGAATTCGTATCCTTTCCACGGTGACTACTCCCCTCCGGCACCTACACCGCCCTCGCTCCCGCCCTTGCCGCCATCATCCTCCTGTGAGGGTGATCTCAAGGGGTTTGGGTCGTTTGATGGTGTTTGTAAGCTCAATTCTAGTGTAGAATTAACCAATGATTTGTATATAAAAGGGAATGGTAGTTTAGAGATTGAGTCAGGTGTGATGATCAGTTGCCTTTTTGCTGGCTGCTCAATAACTGTTAATTTAAGTGGGGATTTTCATTTGGGTAGGAATGCTTCTATTGTTGCTGGAGCTCTTTGGGTTGTGGCTAGGGATGCTACTCTACTAGAAGACTCTGTAGTTAATGTTACCGCGTTGGGAGGTTCGCCCCCAGCTCAGACTAGTGGGACTCCTGCTGGGTTTCAGGGTGCAGGCGGTGGGCATGGGGGGAGAGGTGCTAATTGTTTGATTGACAACTCGAAGCTCCCGGAGGATGTTTGGGGTGGGGATGCTTATGCTTGGTCGGAATTGGACAAGCCTTGGAGTTTTGGGAGTCGGGGTGGGACTACTAGTAGAGAGGTGGATTATGGCGGTGGAGGTGGTGGACGGATAGTGTTTAATGTAACGGGTTCAATTGTATTGGGTGGAAGTCTTTTGGCCAATGGTGGTAATGCTGGTATCAAGGGTGGTGGAGGGTCTGGTGGCAGCGTCTTTTTAAAGGCTCAAAAGATGAATGGAAAAGGACGAGTAAGCGCATCTGGAGGTGATGGATTTGCTGGAGGTGGTGGTGGAAGAGTTTGTATCCACGTCTTTAGCAGACACGATGACCAGTACTTCCTTGTTCACGGTGGAAAGAGTTTTGGCTGCCCCAAAAACTCTGGTGCTGCTGGGACATTTTATGATGCTGTGCCTCGGAGATTGATCATCAACAACTACAATTTATCAACAGAGACTGATACACTACTTCTAGAGTTTCCTAATCAGCCCCTTTGGACAAATGTCTACATACAGAATCAAGCAAAGGCTACTGTTCCTTTGCTCTGGAGCCGTCTTCAGGTTCAGGGACAACTTAGTTTGTCATCTGGTTCAGCTTTGACTTTTGGACTGGCGCATTATGCCTCATCAGCATTTGAATTAATTGCGGAGGAGCTCTTGATGAGTGATTCGTTGATCAAGATATACGGGGCTTTGCGTATGACTGTCAAGATGCACTTAATGCTGAATTCAAAAATGATGATAGACGGTAATGGTGATACAATGGTTGCTACTTCTCTTCTTGAGGTCAGCAATCTGATGGTTCTCAAGGAATCATCTGTAATTCATTCGACTGCAAATATGGGAGTTCATGGTCAAGGATACTTGAATTTAACTGGCCCTGGAAATTTGATTGAGGCTCAAAGACTGGTTCTTTCATTATTTTACAGTATCTATGTTGCACCTGAATCAGTTTTGCGAGGTCCTCTGAAAAATGCAAGCTTCCATAACAGCATGACTCCACGACTCTACTGTGAACACCATCACTGCCCTGTGGAAATACTTCACCCACCTGAGGATTGTAATGTGAACTCTTCGTTGCCCTTCACTCTTCAGATATGTCGAGTTGAAGATGTAAGTGTTGAGGGTGTTGTTGAAGGATCGGTTGTCCATTTCCATTGGGTCAGATCTGTGGTTGTCCCACCTACAGGCGTTATTAGTGCATCTGGATTGGGTTGCATTGGAGGTGTTGGTCAAGGGAACCTTTCCAATAATGGCCTTGGAGGAGGTGGTGGGCATGGTGGAAAAGGTGGAGATGGCTATTATGATGGCAGGTTTGCCAATGGTGGTATTATATATGGTGATGCTGATTTGCCATGTGAGCTTGGCAGTGGCAGTGGAAATGCTAGTTTGCCAGGATCAACTGCAGGAGGCGGTATTATAGTGTTGGGGTCGCTGGAGCATTCCTTGCCAAGCTTGTCTGTTGATGGTTTGATGACTGCTGACGGGCAGAGCTATGAAGATGGTCTTATTGAGCATGGCAATGCAATGTTTTCAAACATTGGTCCAAACATTGGTCCTGGTGGTGGTTCTGGTGGAACCATTCTTTTGTTTGTTCAGACATTGGCTCTCAGAAACTCTTCTCGTATTTCAGCTGTTGGAGGGAATGGTAGTCCAAATGGTGGTGGTGGTGGTGGTGGAAGGATACACTTCCACTGGTCAGATATTCCTGTTGCAGATGAGTACCAGCCCATAGCTGAAGTGAAAGGGAGAATCCTTGTTAGGGGCGGATTGGGCAAAAGTCAGGGCCATCCTGGGGAAGAAGGAACTGTGACTGGGAAGGAATGTCCCAAAGGGCTACATGGGATATTCTGTGAGGAATGTCCTGTTGGCACATTCAAAAATGTGTCTGGATCTGATGCTGCCTTGTGTCATAGTTGCCCAGCTAATGAACTTCCAGATCGTGGCATGTATATTTCTATTCGAGGTGGTGTTACTGAGACCCCTTGCCCTTACAAGTGTGTATCTGATATTTATCACATGCCACACTGTCGCACAACACTGGAAGAGTTAGTCTACACATTGGGCGGGCCATGGTGGTTTGGATTTTTTCTGTTGAGTCTCCTTACCCTGTTAGCTGTAGTGCTCAGTGTTGCACGGATGAAATTTGCTTCTGGGGATGAACTTCAAGGCCTATTACACCCCCGGCGACGTGCATTGGATCATTCCTTCCCTTTCCTTGAGTCTTTGAATGAGGTTTTGGAGACAAATAGAAATGAAGAAGCACAGAGCCATGTGCATAGAATGTATTTCATGGGTCCAAATACTTTCAGTGAGCCATGGCATCTACCTCACTCTCCTTCTGATCAAGTAAAGGAGATAGTGTACGAGGATGCATTTATTCGTTTTGTTGATGAGATCAATGGTTTAGCTTCTTATCATTGGTGGGAAGGATCAGTGTACAGTATACTATCTGTTCTTGCATACCCACTAGCATGGTCATGGTTGCAGTGGCGGCGAAGAAAGAAGTTGCAGCGGTTGCGTGAGTTTGTTCGATCAGAATATGATCACTCCTGTTTGCGTTCTTGTCGATCCCGTGCTCTTTATGAAGGGCTAAAGCTATCTGCTACCACGGACTTGATGCTTGCATATATGGACTTTTACCTGGGTGGAGATGAAAAGAGATCTGACCTTCCTCCTCGTCTTAACCAGCGTCTCCCTATGACATTGGTATTTGGAGGTGATGGAAGCTACATGGCTCCATTCTCTCTTCATAATGATAATGTATTAACTAGCCTTATGAGTCAGTCTGTGCCACCGACAGTTTGGTATCGCTTTGTAGCTGGTTTAAATGCTCAATTGCGTTTGGTTCGTCGTGGACAACTTAAAATGACCTTTGAACCTGTTATTGCCTGGATTGAAACCTTTGTGAACCTTTCCCTGAGCAACCATGGCATGCAAGTTAATCTGGCTTTGTTTCAGCCAACTGCTTTTGGTTATTCTCAGTTTGGACTTGTGGTGCGTCAAGCCAGAGATGGGCAATCAACCAGACACGTTGTCAATGGATTCCCAGTTCCAAAACCACAATCACGGATTCATAAGGCTGATCAGCATGAGGATGCAAAAGAAAATGAAGACCATGCAAAAGAAGATGAACTAATTATGATGAATAGGAAAATATCTGGATGTATTCTTCAAGGAAAGAGTCTGTACATGCTCAATGATAGAAAGGATATTTGCTATCCCCTGAACTTCATACTGTGTAACACTAAGCCAGCTGGTCATCAGGATCTGATTGGTCTTGCCCTCTCAATGCTACTTCTTGGAGACTTTAGCTTAGTAGTCCTCACTTTGATCCAGCTATATTCTACCTCAATTTTGGACTTCTTTCTGGTTCTGTTTTTCCTTCCTCTTGGAGTATTACTTCCATTTCCTGCTGGAATAAATGCATTGTTCAGCAAAGGACCTAGAAAATCTGCAGGCCTTGCTCGAATACATGCTCTTTGGAATATCACTTCGTTGATTAATGTTACCATCGCGTTAATTTGTGGATTGGTTCATTACAAGACTCAACCAAGGAAAAATTCTTTAGGCGTGCATGCTTGGAATTTTGGCTGGGAGGAAAGTGAATGGTGGTTGCTCCCTTGTGGTTTAATTCTATGCAAGCTTCTTCAGGCCCGACTAATTGATTATCATATAGCTAACCAAGAGATTCAGGATCCGACATTATATAGCAAGGACCCTGACATTTTCTGGCAGTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29615.p1 GENE.R_Transcript_29615~~R_Transcript_29615.p1 ORF type:complete len:1451 (+),score=309.82 R_Transcript_29615:241-4593(+)
MSGAWSVNLCQTILVVIVVLVNSNKLGFGFDDEDYGLFSIVELSNSYPFHGDYSPPAPTPPSLPPLPPSSSCEGDLKGFGSFDGVCKLNSSVELTNDLYIKGNGSLEIESGVMISCLFAGCSITVNLSGDFHLGRNASIVAGALWVVARDATLLEDSVVNVTALGGSPPAQTSGTPAGFQGAGGGHGGRGANCLIDNSKLPEDVWGGDAYAWSELDKPWSFGSRGGTTSREVDYGGGGGGRIVFNVTGSIVLGGSLLANGGNAGIKGGGGSGGSVFLKAQKMNGKGRVSASGGDGFAGGGGGRVCIHVFSRHDDQYFLVHGGKSFGCPKNSGAAGTFYDAVPRRLIINNYNLSTETDTLLLEFPNQPLWTNVYIQNQAKATVPLLWSRLQVQGQLSLSSGSALTFGLAHYASSAFELIAEELLMSDSLIKIYGALRMTVKMHLMLNSKMMIDGNGDTMVATSLLEVSNLMVLKESSVIHSTANMGVHGQGYLNLTGPGNLIEAQRLVLSLFYSIYVAPESVLRGPLKNASFHNSMTPRLYCEHHHCPVEILHPPEDCNVNSSLPFTLQICRVEDVSVEGVVEGSVVHFHWVRSVVVPPTGVISASGLGCIGGVGQGNLSNNGLGGGGGHGGKGGDGYYDGRFANGGIIYGDADLPCELGSGSGNASLPGSTAGGGIIVLGSLEHSLPSLSVDGLMTADGQSYEDGLIEHGNAMFSNIGPNIGPGGGSGGTILLFVQTLALRNSSRISAVGGNGSPNGGGGGGGRIHFHWSDIPVADEYQPIAEVKGRILVRGGLGKSQGHPGEEGTVTGKECPKGLHGIFCEECPVGTFKNVSGSDAALCHSCPANELPDRGMYISIRGGVTETPCPYKCVSDIYHMPHCRTTLEELVYTLGGPWWFGFFLLSLLTLLAVVLSVARMKFASGDELQGLLHPRRRALDHSFPFLESLNEVLETNRNEEAQSHVHRMYFMGPNTFSEPWHLPHSPSDQVKEIVYEDAFIRFVDEINGLASYHWWEGSVYSILSVLAYPLAWSWLQWRRRKKLQRLREFVRSEYDHSCLRSCRSRALYEGLKLSATTDLMLAYMDFYLGGDEKRSDLPPRLNQRLPMTLVFGGDGSYMAPFSLHNDNVLTSLMSQSVPPTVWYRFVAGLNAQLRLVRRGQLKMTFEPVIAWIETFVNLSLSNHGMQVNLALFQPTAFGYSQFGLVVRQARDGQSTRHVVNGFPVPKPQSRIHKADQHEDAKENEDHAKEDELIMMNRKISGCILQGKSLYMLNDRKDICYPLNFILCNTKPAGHQDLIGLALSMLLLGDFSLVVLTLIQLYSTSILDFFLVLFFLPLGVLLPFPAGINALFSKGPRKSAGLARIHALWNITSLINVTIALICGLVHYKTQPRKNSLGVHAWNFGWEESEWWLLPCGLILCKLLQARLIDYHIANQEIQDPTLYSKDPDIFWQS*

Click here to download the sequence:
Link to NCBI Protein BLAST