Transcript Information: R_Transcript_296153.p1


Annotated TAIR IDAT5G20480.1
Annotated Gene NameEF-TU receptor
Annotated Gene Symbol(s)EFR
Annotation TypeHomolog
Chromosome Positionchr5:6922497-6925679 | Forward length=1031
E-Value2E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.025038355219093
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.031492190984505
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_296153.p1 GENE.R_Transcript_296153~~R_Transcript_296153.p1 ORF type:complete len:729 (-),score=88.08,LRR_8|PF13855.2|0.43,LRR_8|PF13855.2|0.0018,LRR_8|PF13855.2|0.00015,LRR_8|PF13855.2|1.1e-08,LRR_8|PF13855.2|7.1e-06,LRR_8|PF13855.2|0.14,LRR_8|PF13855.2|0.014,LRR_8|PF13855.2|9.7e-08,LRR_8|PF13855.2|2.6e-06,LRR_8|PF13855.2|0.00018,LRR_4|PF12799.3|31,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|5.4e+02,LRR_4|PF12799.3|0.00012,LRR_4|PF12799.3|1.4,LRR_1|PF00560.29|6.9,LRR_1|PF00560.29|23,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|5.3e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|8.2e+02,LRR_1|PF00560.29|57,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|86,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|95,LRR_1|PF00560.29|16,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|97,LRR_1|PF00560.29|77,LRR_1|PF00560.29|24,LRR_1|PF00560.29|21,LRR_1|PF00560.29|37,LRRNT_2|PF08263.8|1.6e-09 R_Transcript_296153:11-2197(-)
ATGGAGAGGGACATTGCAGCAACCTTGATGTTGATTCTCCTTCTCAGTTTCCTTCTCTTCCCTTCTCAAAGCCAGCCAAACAATCCACTAGGACGCATGTTTAGCAACCACACAGATCAACAATCTCTTATTGCTTTCAAATCTTACATAACTTGGGATCCTCAACGAGTTTTCGAAACGTGGAATTCTAGCATTCCCTTCTGTCATTGGAGTGGTGTAACCTGCAATGTTACCGAGCAACGAGTCACAGGTCTTGATCTCCATAGCCTAGGCCTTGCAGGCACCATTGCTCCCCATATTGGAAACCTTTCTTTCCTAAGCACCCTCGATCTTGAAAACAATACCTTTACTGGAAGAATCCCACATGAGATTGGGAATCTCTTTAGGCTAAAATCACTAAATCTCGGCTTAAACAGCCTTAAAGGAGCTATCCCTTCTTCTCTAGGCTTTTGCTCACAGCTCATGAGCCTTGTTCTGTTTAACAACTATCTTGAAGGAAGTATCCCATCAGAGCTAGGCAAGCTTTCCAAACTCAAAATGTTAGTCATGCGGCGTGACAACCTTACAGGCCCAATTCCGCAATCTTTCGCAAACCTTTCTTCCCTTGAGAGCATTGATTTGGGGCAAAATTTGTTGACAGGACCACTACCAGAGGGTCTGGGTCATCTTCCACGTCTAGAGGAGATAGGCATTGGTGAGAATCAATTAGAGGGTGAAATCCCACCTTCAATATTCAATCTATCTTCACTAAGAGTACTGAGTCTGACAAAAAATAGAATATCAGGTATTCTTCCTTCTGATATGTTTTTCAGATTAAGTAATTTATCACTGATTTTCCTTGGTGGGAATCAGTTATCTGGTCACTTACCTATTTCTTTAGGCAATGCTTCTAGTCTCACTAAGGTTGATTTGGGTTCTAATAATTTCATTGGGCATATTCCATTGCTATCTAGTCTCCCAGAACTTCAAGATTTAAATTTGGAAATTAACAACCTTGTCACTAATGGTGAACACGGATGGGATTTCCTTACTTCTCTGGCTAATTCTACACAGCTTCAAAACTTGTATTTGGGGAGCAACTTGGCCACTGGTAAGCTTCCCTCCTCTATAGGGAACCTTTCTCAACACTTATCTGAGTTTGTCATATGGGAAAATGACTTGGAAGGAAGCTTACCTGCTGAAATTGGTAATTTGGCCGGCCTCTCCGCACTGTATCTTTCATCCAATTTATTCAGTGGACATATTCCACCATCTATGGGAAACATGTCAAAGCTACAAGTAATTTATATGGATGAAAATAATTTTTCAGGGGAGATACCGGAGTCATTTGGTAACTTGAATGTCTTGTCAGTTATGAGCATAGGTAAAAACTATCTAAGTGGAGCCATACCATCAAGTCTTGGAAACCTTCAACATCTTCAACAACTCGACCTCTCAGACAATATGCTAAACAGAACCATCCCTATTGAGATCTTTGACATTCCAAGCTTAGATTTATACCTTAATCTTTCATTTAACTCCTTGAGCGGTAATATCCCTGAACAAATAGGCAACTTAAAGATGATTGATAAAATAGATTTATCCAGTAATCAACTCTCGGGAGACATACCATCTTCTATAGGAAGTTGTTCGGCTCTTGAGTACCTAAATTTGTCCAACAATGCTCTTGACGGTCAAATACCAAAGACTCTGGGTGATATAAAGGGGTTTGAGTTCATTGATTTTTCATCAAACAACTTGTCTGGAGAGATTCCCGTCTCTCTAATCTCTCTTCGTTTTCTACAATACTTGAATCTTTCCATGAATCACCTTGAAGGTATGGTGCCATCAACGGGCATATTTGCAAACGCAACTATTGTTTCGCTTTCTGGAAACCCTCACCTTTGTGGAGGAATAGCAGAGTTGAATCTTCCCAAATCTAACCTCCCGCATGCAAAGAGGTCAAAAGCAAAGTTGATCATAGGACTTGTAGTCGGTGTAGTGGCGCCTTTCACTCTCATAGTAGGAGCTCTAGTTGTTCTGTTATTGAGAAAAACATGGCAACGGAAAGCTCCACATGTGGCCCTTGAAAATGCTTTCCCACACGAGTACAAGTTGTACTCATATCCAGGGCCGGTTCTGAGGTTTAGTAGGACTTTTGACTGTCGGGATAGGATGGCTGCATATTCATCCGTTCGAGCTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_296153.p1 GENE.R_Transcript_296153~~R_Transcript_296153.p1 ORF type:complete len:729 (-),score=88.08,LRR_8|PF13855.2|0.43,LRR_8|PF13855.2|0.0018,LRR_8|PF13855.2|0.00015,LRR_8|PF13855.2|1.1e-08,LRR_8|PF13855.2|7.1e-06,LRR_8|PF13855.2|0.14,LRR_8|PF13855.2|0.014,LRR_8|PF13855.2|9.7e-08,LRR_8|PF13855.2|2.6e-06,LRR_8|PF13855.2|0.00018,LRR_4|PF12799.3|31,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|5.4e+02,LRR_4|PF12799.3|0.00012,LRR_4|PF12799.3|1.4,LRR_1|PF00560.29|6.9,LRR_1|PF00560.29|23,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|5.3e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|8.2e+02,LRR_1|PF00560.29|57,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|86,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|95,LRR_1|PF00560.29|16,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|97,LRR_1|PF00560.29|77,LRR_1|PF00560.29|24,LRR_1|PF00560.29|21,LRR_1|PF00560.29|37,LRRNT_2|PF08263.8|1.6e-09 R_Transcript_296153:11-2197(-)
MERDIAATLMLILLLSFLLFPSQSQPNNPLGRMFSNHTDQQSLIAFKSYITWDPQRVFETWNSSIPFCHWSGVTCNVTEQRVTGLDLHSLGLAGTIAPHIGNLSFLSTLDLENNTFTGRIPHEIGNLFRLKSLNLGLNSLKGAIPSSLGFCSQLMSLVLFNNYLEGSIPSELGKLSKLKMLVMRRDNLTGPIPQSFANLSSLESIDLGQNLLTGPLPEGLGHLPRLEEIGIGENQLEGEIPPSIFNLSSLRVLSLTKNRISGILPSDMFFRLSNLSLIFLGGNQLSGHLPISLGNASSLTKVDLGSNNFIGHIPLLSSLPELQDLNLEINNLVTNGEHGWDFLTSLANSTQLQNLYLGSNLATGKLPSSIGNLSQHLSEFVIWENDLEGSLPAEIGNLAGLSALYLSSNLFSGHIPPSMGNMSKLQVIYMDENNFSGEIPESFGNLNVLSVMSIGKNYLSGAIPSSLGNLQHLQQLDLSDNMLNRTIPIEIFDIPSLDLYLNLSFNSLSGNIPEQIGNLKMIDKIDLSSNQLSGDIPSSIGSCSALEYLNLSNNALDGQIPKTLGDIKGFEFIDFSSNNLSGEIPVSLISLRFLQYLNLSMNHLEGMVPSTGIFANATIVSLSGNPHLCGGIAELNLPKSNLPHAKRSKAKLIIGLVVGVVAPFTLIVGALVVLLLRKTWQRKAPHVALENAFPHEYKLYSYPGPVLRFSRTFDCRDRMAAYSSVRAL*

Click here to download the sequence:
Link to NCBI Protein BLAST