Transcript Information: R_Transcript_296257.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4056213545493
Replicate 20
Replicate 30.25451930662392
Condition 2: 8 Hour
Replicate 10
Replicate 20.12422712133992
Replicate 30
Condition 3: 24 Hour
Replicate 10.12754337348725
Replicate 20
Replicate 30.12159835937165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_296257.p1 GENE.R_Transcript_296257~~R_Transcript_296257.p1 ORF type:internal len:180 (+),score=34.15,RVT_1|PF00078.23|4.2e-11,RVT_1|PF00078.23|2e+02 R_Transcript_296257:2-538(+)
TCAAGAATGCTCAGGAACTTGTGGAAGGAATGGAGCTTTTTGTTTCATCCCAAATGTGTCAATGTAGGGATTACCCATCTTGCATTTGCTGATGATCTTCTTATTTTCACTAGGGGGGATGTGCCTTCTGTGCTTGCTGCTGTACAATGTGTTCAAGACTTCTCTCACATGTCAGGATTACACATAAATCCCCAGAAATCTAACATTTTTTTTGGTGGTATAAGGCAGGACATTAAGAAGGATATACTTAGAGAGACTGGGTTTATAGAAGGTCAACTCCCTGTGAAGTACTTAGGTCTCCCCCTTAGTTCAACTGGAATTCATGCACATATCTGTAATGATCTTGTTGAAACAATCAGAAAGAAGTTGTCACTTTGGGATGCTCATTATCTTTCTTATGCAGACAGAATTGCACTGTTTAACATTGTTTTGTTTGGTCTTGAGAATTTTTGGTGCAGTGTTTTCCTTTTACCCAAAGGTGTCACTGAGAAAATTGAGAAACTTTGTAGGCACTTTATTTGGGGTGTTTCTGAGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_296257.p1 GENE.R_Transcript_296257~~R_Transcript_296257.p1 ORF type:internal len:180 (+),score=34.15,RVT_1|PF00078.23|4.2e-11,RVT_1|PF00078.23|2e+02 R_Transcript_296257:2-538(+)
SRMLRNLWKEWSFLFHPKCVNVGITHLAFADDLLIFTRGDVPSVLAAVQCVQDFSHMSGLHINPQKSNIFFGGIRQDIKKDILRETGFIEGQLPVKYLGLPLSSTGIHAHICNDLVETIRKKLSLWDAHYLSYADRIALFNIVLFGLENFWCSVFLLPKGVTEKIEKLCRHFIWGVSEE

Click here to download the sequence:
Link to NCBI Protein BLAST