Transcript Information: R_Transcript_29676.p1


Annotated TAIR IDAT4G37460.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)SRFR1
Annotation TypeOrtholog
Chromosome Positionchr4:17608623-17615534 | Reverse length=1052
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.330252985747
Replicate 210.77254522811
Replicate 313.238453383256
Condition 2: 8 Hour
Replicate 111.970340559883
Replicate 213.680616963823
Replicate 317.027019062105
Condition 3: 24 Hour
Replicate 115.401510560309
Replicate 212.36204733557
Replicate 313.793703534531


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29676.p1 GENE.R_Transcript_29676~~R_Transcript_29676.p1 ORF type:complete len:1033 (+),score=244.93,TPR_1|PF00515.24|4.1e-05,TPR_1|PF00515.24|2.2,TPR_1|PF00515.24|73,TPR_1|PF00515.24|2.5e-05,TPR_1|PF00515.24|4.5e-05,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|0.0024,TPR_1|PF00515.24|3.6,TPR_1|PF00515.24|0.0043,TPR_1|PF00515.24|0.00044,TPR_11|PF13414.2|2.5e-06,TPR_11|PF13414.2|40,TPR_11|PF13414.2|7.2e-08,TPR_11|PF13414.2|5.4e-09,TPR_11|PF13414.2|0.0009,TPR_11|PF13414.2|9.3e-10,TPR_11|PF13414.2|8.6e-07,TPR_11|PF13414.2|0.0036,TPR_2|PF07719.13|0.48,TPR_2|PF07719.13|0.69,TPR_2|PF07719.13|25,TPR_2|PF07719.13|0.0011,TPR_2|PF07719.13|0.00041,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|0.99,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|4,TPR_2|PF07719.13|0.0022,TPR_8|PF13181.2|8.8e+02,TPR_8|PF13181.2|0.3,TPR_8|PF13181.2|9.4e+02,TPR_8|PF13181.2|0.71,TPR_8|PF13181.2|0.55,TPR_8|PF13181.2|1.8,TPR_8|PF13181.2|3.3,TPR_8|PF13181.2|3.2,TPR_8|PF13181.2|1.1,TPR_8|PF13181.2|0.08,TPR_16|PF13432.2|2e+03,TPR_16|PF13432.2|0.1,TPR_16|PF13432.2|0.022,TPR_16|PF13432.2|2.1e-06,TPR_16|PF13432.2|1.2,TPR_16|PF13432.2|3.5,TPR_16|PF13432.2|0.43,TPR_17|PF13431.2|0.042,TPR_17|PF13431.2|6.6,TPR_17|PF13431.2|0.31,TPR_17|PF13431.2|0.32,TPR_17|PF13431.2|5.6,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.12,TPR_17|PF13431.2|40,TPR_12|PF13424.2|0.00063,TPR_12|PF13424.2|0.0094,TPR_12|PF13424.2|2,TPR_12|PF13424.2|0.00022,TPR_12|PF13424.2|0.0046,TPR_12|PF13424.2|0.002,TPR_9|PF13371.2|0.2,TPR_9|PF13371.2|18,TPR_9|PF13371.2|0.25,TPR_9|PF13371.2|0.014,TPR_9|PF13371.2|0.06,TPR_9|PF13371.2|0.0055,TPR_9|PF13371.2|4.4,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|23,TPR_14|PF13428.2|18,TPR_14|PF13428.2|0.056,TPR_14|PF13428.2|0.015,TPR_14|PF13428.2|45,TPR_14|PF13428.2|0.33,TPR_14|PF13428.2|8.4e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|1.2,TPR_19|PF14559.2|3.1e+03,TPR_19|PF14559.2|37,TPR_19|PF14559.2|0.00018,TPR_19|PF14559.2|2.6,TPR_19|PF14559.2|0.59,TPR_19|PF14559.2|0.22,ANAPC3|PF12895.3|0.0018,ANAPC3|PF12895.3|2.4e+02,ANAPC3|PF12895.3|26,ANAPC3|PF12895.3|59,ANAPC3|PF12895.3|0.0033,TPR_7|PF13176.2|52,TPR_7|PF13176.2|4.1e+03,TPR_7|PF13176.2|6.6e+02,TPR_7|PF13176.2|8.8e+03,TPR_7|PF13176.2|5.5e+02,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|57,TPR_7|PF13176.2|1,TPR_7|PF13176.2|2,TPR_7|PF13176.2|5.8e+03,TPR_7|PF13176.2|0.54,TPR_6|PF13174.2|3.6e+02,TPR_6|PF13174.2|5.1e+02,TPR_6|PF13174.2|3.6e+03,TPR_6|PF13174.2|39,TPR_6|PF13174.2|40,TPR_6|PF13174.2|1.1e+04,TPR_6|PF13174.2|7.9e+02,TPR_6|PF13174.2|35,TPR_6|PF13174.2|9.1 R_Transcript_29676:309-3407(+)
ATGGCGGCCGAGAGAGTGGAGCTTGCGAAGCTCTGTAGCTCTCGGAACTGGTCAAAGGCCATTCGCATTCTTGATTCTCTTCTTGCTCGCTCTTCCTCCATTCAAGACCTCTGCAATCGAGCGTTCTGTTACAGTCAATTGGAGCTACACAAGCATGTGATCAAGGATTGTGATCGAGCTCTTGAACTTGATCCCGGTCTCCTTCAAGCTTACATTCTTCAAGGTCATGCATATGCTCATTTGGGAAGGAAAGATGATGCTATCTTGGTCTGGAAGCAAGGTTATGAACAGGCTCTAAATCAGTCTGCAGATTTGAAGCAATTATTAGAATTGGAAGAGCTGCTGGCAAAGGAGAATGCAAATGCAAATGGAAATATAAATCCAGAGCAGCATCCTATGGAGCTTAATGCATCATCATCTGCACCACAAACAGTCCCAGAAAGCCACAGTGTCAGTGATTCTGAAACTTCAAAGGATCATAGTAAGATTAGTGATGATGTTGAAACCAGCAGTGAATTTGATGCTACATCCATGGTTCAGAGCAAATTGGTGCATGAATCTCATGTGCAGAATGGGTCAGTGGAAAAGGTGAAGGAAACTAGAAAGTTTGAAAGCAAATCAAATGGTGCTTATAAAAAGTTGAGCAGTGAGTTGGAATCACACAGCAAGCCAAGTGATGAACCACGCAATAAAAGCAACATGCCTAAGCTTCCCAGCAAGTCGACCAGCAAATCTTCTGAAGAATTTGAGTGGGCAGACGCCATAAAAAAGAATCAGAAAGTTTGTGTTGCTCGGATTTCAAAAACTAAATCAATAAGCTTAGATTTTCGGTTATCAAGGGGAATAGCTGAGGTAAATGAGGGAAGGTACACACATGCAATATCCATTTTTGACCAGATATTGAAAGAGGATTCAAATTATCCAGAGGCATTGATCGGAAGAGGGACAGCATATGCATTCCAACGAGAACTTGATGCTGCAATTGCTGATTTTACCAAGGCTATAGAGGCAAACCCATTAGCTGGTGAGGCATGGAAACGCAGAGGGCAAGCACGAGCTGCTTTGGGAGACTCTGCTGGGGCTATTGATGACTTGACAAAGGCATTGGAGTTTGAACCTAATTCATCAGACATACTGCATGAGAGGGGAATTGTTAATTTCAAATTCAAGGATTTTGACGCAGCTGTTAAAGACCTTTCTGCTTGTGTAAAGCTTGACAGGGCCAACAAGTCTGCATACACTTATTTGGGTCTGTCTTTATCTTCAGTTGGTGAATACAAGAAAGCCGAGGAATCACATATGAAAGCACTTCAATTTGATGGTGATTTCCTTGAGGCATGGACTCATCTTACGCAGCTTTATCAAGATTTGGCAAATACAACTAAGGCCTTTGACTGTCTTACACGGGTTCTAGAGATTGACAGCAGGTATTCAAAAGCATACTACTTGCGTGGACTGCTTAACCATGCGATGGGAGATCACAGGAATGCCATCAAGGATCTGTCCATGTCGCTAAGTATTGAGACCCCCAATGTGGAATGTTTGTATTTGAGAGCATCCTGTCACCATGCTATAGGACAATTTAGAGAAGCGGTCAAAGATTATGATGCTGCTTTAGATTTGGAATTAGACTCTATGGAGAAGTTTGTGCTTCAGTGTCTTGCGTTTTACCAGAAAGAAATAGCTCTCTATACGGCATCAAAAATTCACAGTGAGTTTTCCTGGTTCGACATTGATGACGACATTGACCCCATTTTTAAGGAGTATTGGTGCAAAAGGTTGCATCCCAAGGATGTATGTGAAAAGGTGTACAGGCAACCTCCATTGCGTGAATCCCTGAAAAAGGGTAAGCTCAGGAAGCAAGACTTTGCTATGACAAAGCAGAAGACTGCTCTTCTTCATGCTGCAGACTCCATTGGACAAAAGATCCAGTACCATTGTCCAGGCTTCTTGTCCAACAAACGTCAGCATCGCATGGCGGGATTGGCTGCCATTGAAATAGCCCAAAAGGTTTCAAAGGCTTGGCGTGCTTTGCAAGCAGAATCGAAGCATTCTGGTAAAGGGATAGCAAAATATGGCAGGAGAGCTCGCAGAAAAGAAAGTGTAAACATGCCTAGTCAGAACAGAGGTGGTCCAGGTTGCAGTACAAGCAGCTCACCAGATACTTCAACATCATATGGGTTTCCAGAAGATAGATCATCTGCTCGTCCTATGATGTCATGGCAAGATGTGTATTCCCTGGCTGTGAAGTGGAGACAAATTTCTGAACCTTGTGATCCTGTTGTGTGGATTAACAAGTTGAGTGAAGAGTTCAATGCTGGATTTGGCTCTCATACTCCACTGATTCTCGGACAAGCAAAAGTTGTCCGCTACTTCCCCAATTTTCGTAGAACATTCGATGCTGCTAAGGCTGTCATAAAGGAAAAGAAGTATGCATGCAGCAAGACAGATGCTGTTATCAACCTATCTGATGAGAGAAAGTTGCAAGATATTATGCATGCCGAATCCTGCTCTGATCTCTACAGAAGTGTTGGTGAGGACTTCTGGGTGGCGACTTGGTGCAACAGTTTGGCATTTGAGGGGAAGCAGTTGGAGGGGACAAGAATTACCCTCTTAAAATCGGGAGAACGTGGGTTTGATTTTGCAATTAGAACTCCCTGTACACCTTCTAGGTGGAATGAGTTTGAGACAGAAATGGCAATGGCATGGGAGGCTCTCTGCCATGCTTATTGTAGCGAAGCTTATGGTTCTACTGATTTCAATGCCCTTGAGAATATCAGAGATGCAATTTTAAGGATGACGTACTACTGGTATAATTTTATGCCCCTATCTAGAGGTTCTGCAGCGGTTGGGTTTGTGGTTTTGCTTGGATTATCTCTTGCAGCAAATATGGAGATCACTGGGAGTATTCCACAAGGAGTGCAAGTGGACTGGGAAGCAATCCTTACTTTTGATCCAGATTCCTTCGTGAATTCTGTAAAGAAATGGTTGTATCCCTGTCTTAAGGTGACTACATCTTGGAAAGACTTTCCTGATGTTGCATCAACCTTGTCAACAACAGGATCTGTCATAGCTGCTCTCAGCTCTTACAATAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29676.p1 GENE.R_Transcript_29676~~R_Transcript_29676.p1 ORF type:complete len:1033 (+),score=244.93,TPR_1|PF00515.24|4.1e-05,TPR_1|PF00515.24|2.2,TPR_1|PF00515.24|73,TPR_1|PF00515.24|2.5e-05,TPR_1|PF00515.24|4.5e-05,TPR_1|PF00515.24|0.81,TPR_1|PF00515.24|0.0024,TPR_1|PF00515.24|3.6,TPR_1|PF00515.24|0.0043,TPR_1|PF00515.24|0.00044,TPR_11|PF13414.2|2.5e-06,TPR_11|PF13414.2|40,TPR_11|PF13414.2|7.2e-08,TPR_11|PF13414.2|5.4e-09,TPR_11|PF13414.2|0.0009,TPR_11|PF13414.2|9.3e-10,TPR_11|PF13414.2|8.6e-07,TPR_11|PF13414.2|0.0036,TPR_2|PF07719.13|0.48,TPR_2|PF07719.13|0.69,TPR_2|PF07719.13|25,TPR_2|PF07719.13|0.0011,TPR_2|PF07719.13|0.00041,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|0.99,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|4,TPR_2|PF07719.13|0.0022,TPR_8|PF13181.2|8.8e+02,TPR_8|PF13181.2|0.3,TPR_8|PF13181.2|9.4e+02,TPR_8|PF13181.2|0.71,TPR_8|PF13181.2|0.55,TPR_8|PF13181.2|1.8,TPR_8|PF13181.2|3.3,TPR_8|PF13181.2|3.2,TPR_8|PF13181.2|1.1,TPR_8|PF13181.2|0.08,TPR_16|PF13432.2|2e+03,TPR_16|PF13432.2|0.1,TPR_16|PF13432.2|0.022,TPR_16|PF13432.2|2.1e-06,TPR_16|PF13432.2|1.2,TPR_16|PF13432.2|3.5,TPR_16|PF13432.2|0.43,TPR_17|PF13431.2|0.042,TPR_17|PF13431.2|6.6,TPR_17|PF13431.2|0.31,TPR_17|PF13431.2|0.32,TPR_17|PF13431.2|5.6,TPR_17|PF13431.2|3.2e+02,TPR_17|PF13431.2|0.12,TPR_17|PF13431.2|40,TPR_12|PF13424.2|0.00063,TPR_12|PF13424.2|0.0094,TPR_12|PF13424.2|2,TPR_12|PF13424.2|0.00022,TPR_12|PF13424.2|0.0046,TPR_12|PF13424.2|0.002,TPR_9|PF13371.2|0.2,TPR_9|PF13371.2|18,TPR_9|PF13371.2|0.25,TPR_9|PF13371.2|0.014,TPR_9|PF13371.2|0.06,TPR_9|PF13371.2|0.0055,TPR_9|PF13371.2|4.4,TPR_14|PF13428.2|2.6e+03,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|23,TPR_14|PF13428.2|18,TPR_14|PF13428.2|0.056,TPR_14|PF13428.2|0.015,TPR_14|PF13428.2|45,TPR_14|PF13428.2|0.33,TPR_14|PF13428.2|8.4e+02,TPR_14|PF13428.2|3.6e+02,TPR_14|PF13428.2|1.2,TPR_19|PF14559.2|3.1e+03,TPR_19|PF14559.2|37,TPR_19|PF14559.2|0.00018,TPR_19|PF14559.2|2.6,TPR_19|PF14559.2|0.59,TPR_19|PF14559.2|0.22,ANAPC3|PF12895.3|0.0018,ANAPC3|PF12895.3|2.4e+02,ANAPC3|PF12895.3|26,ANAPC3|PF12895.3|59,ANAPC3|PF12895.3|0.0033,TPR_7|PF13176.2|52,TPR_7|PF13176.2|4.1e+03,TPR_7|PF13176.2|6.6e+02,TPR_7|PF13176.2|8.8e+03,TPR_7|PF13176.2|5.5e+02,TPR_7|PF13176.2|1.1e+03,TPR_7|PF13176.2|57,TPR_7|PF13176.2|1,TPR_7|PF13176.2|2,TPR_7|PF13176.2|5.8e+03,TPR_7|PF13176.2|0.54,TPR_6|PF13174.2|3.6e+02,TPR_6|PF13174.2|5.1e+02,TPR_6|PF13174.2|3.6e+03,TPR_6|PF13174.2|39,TPR_6|PF13174.2|40,TPR_6|PF13174.2|1.1e+04,TPR_6|PF13174.2|7.9e+02,TPR_6|PF13174.2|35,TPR_6|PF13174.2|9.1 R_Transcript_29676:309-3407(+)
MAAERVELAKLCSSRNWSKAIRILDSLLARSSSIQDLCNRAFCYSQLELHKHVIKDCDRALELDPGLLQAYILQGHAYAHLGRKDDAILVWKQGYEQALNQSADLKQLLELEELLAKENANANGNINPEQHPMELNASSSAPQTVPESHSVSDSETSKDHSKISDDVETSSEFDATSMVQSKLVHESHVQNGSVEKVKETRKFESKSNGAYKKLSSELESHSKPSDEPRNKSNMPKLPSKSTSKSSEEFEWADAIKKNQKVCVARISKTKSISLDFRLSRGIAEVNEGRYTHAISIFDQILKEDSNYPEALIGRGTAYAFQRELDAAIADFTKAIEANPLAGEAWKRRGQARAALGDSAGAIDDLTKALEFEPNSSDILHERGIVNFKFKDFDAAVKDLSACVKLDRANKSAYTYLGLSLSSVGEYKKAEESHMKALQFDGDFLEAWTHLTQLYQDLANTTKAFDCLTRVLEIDSRYSKAYYLRGLLNHAMGDHRNAIKDLSMSLSIETPNVECLYLRASCHHAIGQFREAVKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIHSEFSWFDIDDDIDPIFKEYWCKRLHPKDVCEKVYRQPPLRESLKKGKLRKQDFAMTKQKTALLHAADSIGQKIQYHCPGFLSNKRQHRMAGLAAIEIAQKVSKAWRALQAESKHSGKGIAKYGRRARRKESVNMPSQNRGGPGCSTSSSPDTSTSYGFPEDRSSARPMMSWQDVYSLAVKWRQISEPCDPVVWINKLSEEFNAGFGSHTPLILGQAKVVRYFPNFRRTFDAAKAVIKEKKYACSKTDAVINLSDERKLQDIMHAESCSDLYRSVGEDFWVATWCNSLAFEGKQLEGTRITLLKSGERGFDFAIRTPCTPSRWNEFETEMAMAWEALCHAYCSEAYGSTDFNALENIRDAILRMTYYWYNFMPLSRGSAAVGFVVLLGLSLAANMEITGSIPQGVQVDWEAILTFDPDSFVNSVKKWLYPCLKVTTSWKDFPDVASTLSTTGSVIAALSSYNN*

Click here to download the sequence:
Link to NCBI Protein BLAST