Transcript Information: R_Transcript_29716.p1


Annotated TAIR IDAT3G03620.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:873904-876252 | Reverse length=500
E-Value7E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8183026238417
Replicate 21.6089119092949
Replicate 31.492009728485
Condition 2: 8 Hour
Replicate 10.75052459608414
Replicate 21.3707820285784
Replicate 33.2686808396865
Condition 3: 24 Hour
Replicate 11.3194142084887
Replicate 21.0985377991475
Replicate 32.2642453124376


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29716.p1 GENE.R_Transcript_29716~~R_Transcript_29716.p1 ORF type:5prime_partial len:261 (+),score=23.95,MatE|PF01554.14|2.6e+02,MatE|PF01554.14|3.3e-19 R_Transcript_29716:3-785(+)
GTGGCTGCTGGAAACATATCTCTATGGTTCATTCCTATTCTGTATCTCAATGTCTATGGCATGACCATGCAAATGTTTCTGCAGGCACAACACAAGAATTTGGTTGTTGGATGGCTGTTTGCAATTTTGTTTTTTGCCCATGCCCTGTTGTCATGGATTTTTGTATATAAACTGAAATGGGGGCTTCCTGGGGTAATGTTTGCACTGATCATAGCATTTGGGGTGAAGGTGCTTGGGGAAGCTGTTTACATCTTTGGAGGTTGGTGCCAAGACACATGGAAAGGATTTTCTAGGGCCGCATTCACTGATCTAAGGCCAGTCTGGAAGTCCTCAATATCTTCAGGTGTAATGCTCTGCATTCAGGTGTGGTATAATGCTGTTCCAGTGTTGTTATCAGGATATATGAAATATGCAACTGTTGCCATTTCTGCCTTCTCCATTTGCCTAAATGTTACTACATGGGAACTCATGATATGTCTCGGCTTTCTAGGGGCTGTGTGTGTACGAGTTTCCAATGAACTAGGGAGAGGGAGTGGCAAGGCCGCAAAATTTTCTGTTGAAGTGATTTTGTACACTTCTCTAATAATCGGCATATTCTTTTCAATCTTGTGTTTGTTATTCGGCCATCAAATTTCTTATTTGTTTACAAGTAATGAGGAAGTTGCAAAAGCCGTTTCAGGCCTTTCTGTCTTACTTGCTTTCTCAATTCTGCTTAATAATGTTGGACCAGTACTTTCAGGTAAGCAATTAATTGACACTTCATATGCTATATTTAGTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29716.p1 GENE.R_Transcript_29716~~R_Transcript_29716.p1 ORF type:5prime_partial len:261 (+),score=23.95,MatE|PF01554.14|2.6e+02,MatE|PF01554.14|3.3e-19 R_Transcript_29716:3-785(+)
VAAGNISLWFIPILYLNVYGMTMQMFLQAQHKNLVVGWLFAILFFAHALLSWIFVYKLKWGLPGVMFALIIAFGVKVLGEAVYIFGGWCQDTWKGFSRAAFTDLRPVWKSSISSGVMLCIQVWYNAVPVLLSGYMKYATVAISAFSICLNVTTWELMICLGFLGAVCVRVSNELGRGSGKAAKFSVEVILYTSLIIGIFFSILCLLFGHQISYLFTSNEEVAKAVSGLSVLLAFSILLNNVGPVLSGKQLIDTSYAIFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST