Transcript Information: R_Transcript_29717.p1


Annotated TAIR IDAT3G03620.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:873904-876252 | Reverse length=500
E-Value2.9E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1819846778227
Replicate 24.0035318590399
Replicate 33.9310291213736
Condition 2: 8 Hour
Replicate 12.6975952907982
Replicate 23.22148297712
Replicate 33.1150009751088
Condition 3: 24 Hour
Replicate 14.0857114557778
Replicate 23.7849067163914
Replicate 34.080758500947


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29717.p1 GENE.R_Transcript_29717~~R_Transcript_29717.p1 ORF type:complete len:472 (+),score=63.28,MatE|PF01554.14|1e-17,MatE|PF01554.14|4.5e-24 R_Transcript_29717:1133-2548(+)
ATGGGTCCGGGGCCAGAAGCAAGGCTTCTTGTATCTCAAGATGATAAGGTTGAGGGCTTTAAGAGAAGGCTATGGGAAGAATCGAAAAGGGTATGGGCAATAGCGTTCCCATCGATGGTGTGCCGTGTGACAACTTATGGAGCATATGTGGCTTCACAATCCTCTTTTGGGTATCTTAGTGAAGTGGACCTTGCAGCATATGCTCTTGTCCAAACAATACTTGTGCGGTTTTCAAACGGTATCTTGCTAGGAATGGCGAGTGTAACTGAGACACTATGTGGAGAAGCATTTGGAGCCAAGCAATTTGACATTATGGGAGTGAACTTGCAAAGGTCCTGGATTGTAAATACTGCTGCAGCTACAGCCATGGTGCCATTCTACTTATTTGCAACACCTATGCTTAGGTTTCTGGGACAGAAAGAGGATATTGCTGTGGCTGCTGGAAACATATCTCTATGGTTCATTCCTATTCTGTATCTCAATGTCTATGGCATGACCATGCAAATGTTTCTGCAGGCACAACACAAGAATTTGGTTGTTGGATGGCTGTTTGCAATTTTGTTTTTTGCCCATGCCCTGTTGTCATGGATTTTTGTATATAAACTGAAATGGGGGCTTCCTGGGGTAATGTTTGCACTGATCATAGCATTTGGGGTGAAGGTGCTTGGGGAAGCTGTTTACATCTTTGGAGGTTGGTGCCAAGACACATGGAAAGGATTTTCTAGGGCCGCATTCACTGATCTAAGGCCAGTCTGGAAGTCCTCAATATCTTCAGGTGTAATGCTCTGCATTCAGGTGTGGTATAATGCTGTTCCAGTGTTATTAGCAGGATATATGAAATATGCAACCGTTGCCATTTCTGCCTTCTCCATTTGCCTAAATGTTACTACATGGGAACTCATGATATGTCTTGGCTTTCTTGGGGCTGTGTGTGTACGAGTTTCAAATGAACTAGGGAGAGGGAGTGGCAAGGCCGCAAAATTTTCTGTTGAAGTGATTTTGTACACTTCTCTAATAATCGGCATATTCTTTTCAATCTTGTGTTTGTTATTCGGCCATCAAATTTCTTATTTGTTTACAAGTAATGAGGAAGTTGCAAAAGCCGTTTCAGGCCTTTCTGTCTTACTTGCTTTCTCAATCCTTCTTAATAACATTGGACCAGTACTTTCAGGGGCAGCAATTGGTTGTGGGTCACAAGGAGCAGTTGCAGTTGTTAATATGTGTTCATATTATGTTATTGGGATTCCTATCGGAGTTCTGCTAGCATATGTTGCCCATTTGGAAGTTAAGGGTATATGGATTGGAATGATGTGTGGAATGGTAACACAAACAGCAGCACTTCTCTATCTTACATGGAAAATTGATTGGACGGAAGAGGTGAAAAAGGCATCCAAACGACTCCATCATTTTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29717.p1 GENE.R_Transcript_29717~~R_Transcript_29717.p1 ORF type:complete len:472 (+),score=63.28,MatE|PF01554.14|1e-17,MatE|PF01554.14|4.5e-24 R_Transcript_29717:1133-2548(+)
MGPGPEARLLVSQDDKVEGFKRRLWEESKRVWAIAFPSMVCRVTTYGAYVASQSSFGYLSEVDLAAYALVQTILVRFSNGILLGMASVTETLCGEAFGAKQFDIMGVNLQRSWIVNTAAATAMVPFYLFATPMLRFLGQKEDIAVAAGNISLWFIPILYLNVYGMTMQMFLQAQHKNLVVGWLFAILFFAHALLSWIFVYKLKWGLPGVMFALIIAFGVKVLGEAVYIFGGWCQDTWKGFSRAAFTDLRPVWKSSISSGVMLCIQVWYNAVPVLLAGYMKYATVAISAFSICLNVTTWELMICLGFLGAVCVRVSNELGRGSGKAAKFSVEVILYTSLIIGIFFSILCLLFGHQISYLFTSNEEVAKAVSGLSVLLAFSILLNNIGPVLSGAAIGCGSQGAVAVVNMCSYYVIGIPIGVLLAYVAHLEVKGIWIGMMCGMVTQTAALLYLTWKIDWTEEVKKASKRLHHFS*

Click here to download the sequence:
Link to NCBI Protein BLAST