Transcript Information: R_Transcript_29730.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeHomolog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1656055370005
Replicate 22.1352169914879
Replicate 32.1353738437091
Condition 2: 8 Hour
Replicate 11.5908895304707
Replicate 21.5791583221176
Replicate 31.640823558905
Condition 3: 24 Hour
Replicate 12.7238076371852
Replicate 21.8690897364896
Replicate 32.9678243643251


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29730.p1 GENE.R_Transcript_29730~~R_Transcript_29730.p1 ORF type:complete len:354 (+),score=9.31,zf-RING_2|PF13639.2|3e-14,zf-RING_11|PF17123.1|7.2e-11,zf-rbx1|PF12678.3|8e-08,zf-C3HC4|PF00097.21|1.2e-06,zf-C3HC4_2|PF13923.2|7.4e-06 R_Transcript_29730:22-1062(+)
ATGGGGGTAGTCATCATAGTCCTCATAGCGGCCCTCTTCTTCATGGGCTTCTTCTCCATCTACATTCGCCACTGCTCCGACGGCCCCGCATCTGGCCGTGGCGGATCTTTTCGGGCCAGAGTCGGGTCGGTGGGCCGGTCACGTCGGGCCCCGCGCGGGCTCGACCCTGGGGTGATCGAATCTTTTCCGACGTTCAATTACGCGGCGGTGAAGTCGTTGAAGATCGGGAAAGGGGCGTTGGAGTGTGCGGTGTGTTTGACGGAGTTCGAAGACGACGATACGCTGCGTTTAATCCCGAAATGTGACCACGTGTTCCATCCTGATTGTATTGACGCCTGGCTTGTGGGCCACACCACGTGCCCCGTTTGTAGGACCAACCTCGTCTCCGACGCGCCCCCCAGCGAGGCCCCCCACGCGGCTGACGTGGCGGTTGAAATTCACGAGGAGCGAGAAGGTCATGACGATGGTGACGGTGGTCATGTGGATGAGGAGCAGGAGAGAGAGTCAATGGAGCAGCCCTTGCACGGGAGTGTGAGGGGAGGGGGGATGATGAGTAGGAACCGTACGATGAGGAGGAACTTGTCGATGGGACGGCCGAGATGGCTTCTTGGAAGAGTGAGGTTCACGAGATCGTTTTCGACTGGACACGTGGCGGTCAAGCAGTGGGAGAACATGGAGAGGTTCACTTTGAGGTTGCCGGATGATGTACGTAAGCAGATTATGAGTGGCAAGCTTGAGAGAACTACCAGCTTGCTGGTTTTGCCTAGGGAGAATAGCTCTAGGAGAGGCTATCGAACCGGAACCGGAACCGGAACCGCAGCCGGGTTCGGTGAGGGTAGTAGTAGAGGTGGGGCCCGGGTGGACCGAGGCCAGAGTGTTCGGTCCGACCAGTGGGTTTTCACACTGGCTCCACCTTTCTTCTCTCGCCAACCATCCGCTAAGGTTTTGGGACCGAGCCAAGATGGGTCTTTGCGTGGTTCTGTTAGGGAGGGATCTTTGCGTGGTTCAATTAGGACCGACTCAGCTCGATTACCCGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29730.p1 GENE.R_Transcript_29730~~R_Transcript_29730.p1 ORF type:complete len:354 (+),score=9.31,zf-RING_2|PF13639.2|3e-14,zf-RING_11|PF17123.1|7.2e-11,zf-rbx1|PF12678.3|8e-08,zf-C3HC4|PF00097.21|1.2e-06,zf-C3HC4_2|PF13923.2|7.4e-06 R_Transcript_29730:22-1062(+)
MGVVIIVLIAALFFMGFFSIYIRHCSDGPASGRGGSFRARVGSVGRSRRAPRGLDPGVIESFPTFNYAAVKSLKIGKGALECAVCLTEFEDDDTLRLIPKCDHVFHPDCIDAWLVGHTTCPVCRTNLVSDAPPSEAPHAADVAVEIHEEREGHDDGDGGHVDEEQERESMEQPLHGSVRGGGMMSRNRTMRRNLSMGRPRWLLGRVRFTRSFSTGHVAVKQWENMERFTLRLPDDVRKQIMSGKLERTTSLLVLPRENSSRRGYRTGTGTGTAAGFGEGSSRGGARVDRGQSVRSDQWVFTLAPPFFSRQPSAKVLGPSQDGSLRGSVREGSLRGSIRTDSARLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST