Transcript Information: R_Transcript_29732.p1


Annotated TAIR IDAT3G05200.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL6
Annotation TypeOrtholog
Chromosome Positionchr3:1477377-1478573 | Forward length=398
E-Value5.2E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.821482415134
Replicate 25.7753319911154
Replicate 37.4785492923171
Condition 2: 8 Hour
Replicate 13.9026314311805
Replicate 25.5758497136118
Replicate 36.0194287147299
Condition 3: 24 Hour
Replicate 19.9149398824018
Replicate 25.6697323626163
Replicate 38.4399889538164


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29732.p1 GENE.R_Transcript_29732~~R_Transcript_29732.p1 ORF type:complete len:389 (-),score=11.86,zf-RING_2|PF13639.2|1e-14,zf-RING_11|PF17123.1|8.2e-11,zf-RING_11|PF17123.1|5.5e+03,zf-rbx1|PF12678.3|3.4e-08,zf-C3HC4|PF00097.21|5.4e-07,zf-C3HC4_2|PF13923.2|4.7e-06 R_Transcript_29732:122-1288(-)
ATGATCCGCCATGTCATCATCCTCATCTTACTCGTCCACCAAACCCGACCCACATCCGCCTCCGACCCGCCCGGCCCGCCAACAGGACCTGACAACAATCTCGGGAACCAGAACTTCAACCCGTCAATGGGGGTAGTCATCATAGTCCTCATAGCGGCCCTCTTCTTCATGGGCTTCTTCTCCATCTACATTCGCCACTGCTCCGACGGCCCCGCATCTGGCCGTGGCGGATCTTTTCGGGCCAGAGTCGGGTCGATGGGCCGGTCACGTCGGGCCCCGCGCGGGCTGGACCCTGGGGTGATCGAATCCTTTCCGACGTTCAATTACGCGGCGGTGAAGTCGTTGAAGATCGGGAAAGGGGCGTTGGAGTGTGCGGTGTGTTTGACGGAGTTCGAAGACGACGATACGCTGCGTTTAATCCCGAAATGTGACCACGTGTTCCATCCTGATTGCATTGACGCCTGGCTTGGAGGCCACACCACGTGCCCCGTTTGTAGGTCCAACCTCGTCCCCGACGCGCCCCACAGCGAGGCCCCCTACGCGCCTGACGTGGCGGTGGAGGTTCACGAGGAGCGAGAAGGTCATCATGATGATGACGGTGCTCATGAGGATGAGGAGCAGGAGAGAGAGTCAATGGAGCAGCCCTTGCACGGGAGTGTGAGGGGAGGGGGGATGATGAGTAGGAACCGTACGATGAGGAGGAACTTGTCGATCGGACGGCCAAGATGGCTTCTTGGAAGAGTGAGGTTCACGAGATCGTTTTCGACTGGACACGTGGCGGTCAAGCAGTGGGAGAACATGGAGAGGTTCACTTTGAGGTTGCCGGATGATGTACGTAAGCAGGTTATGAGTGGCAAGCTTGAGAGAACTACCAGCTTGCTGGTTTTGCCTAGGGAGAATAGCTCTAGGAGAGGCTATCGAAGCGGAACCGGAACCGGAACCGCACCTGGGTTCGGTGAGGGTAGTAGTAGAGGTGGGGCCCGGGTGGACCGAGGCCAGAGTGTTCGGTCCGACCAGTGGGTTTTCTCTCTGGCCCCACCTTTCTTCTCTCGCCAACCATCCGCTAAGGTTTTGGGATCCAGCCGAGATGGGTCTTTGCGTGGTTCTGTTAGGGAGGGATCTTTGCGTGGTTCAATTAGGACCGACTCAGCTAGATTACCCGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29732.p1 GENE.R_Transcript_29732~~R_Transcript_29732.p1 ORF type:complete len:389 (-),score=11.86,zf-RING_2|PF13639.2|1e-14,zf-RING_11|PF17123.1|8.2e-11,zf-RING_11|PF17123.1|5.5e+03,zf-rbx1|PF12678.3|3.4e-08,zf-C3HC4|PF00097.21|5.4e-07,zf-C3HC4_2|PF13923.2|4.7e-06 R_Transcript_29732:122-1288(-)
MIRHVIILILLVHQTRPTSASDPPGPPTGPDNNLGNQNFNPSMGVVIIVLIAALFFMGFFSIYIRHCSDGPASGRGGSFRARVGSMGRSRRAPRGLDPGVIESFPTFNYAAVKSLKIGKGALECAVCLTEFEDDDTLRLIPKCDHVFHPDCIDAWLGGHTTCPVCRSNLVPDAPHSEAPYAPDVAVEVHEEREGHHDDDGAHEDEEQERESMEQPLHGSVRGGGMMSRNRTMRRNLSIGRPRWLLGRVRFTRSFSTGHVAVKQWENMERFTLRLPDDVRKQVMSGKLERTTSLLVLPRENSSRRGYRSGTGTGTAPGFGEGSSRGGARVDRGQSVRSDQWVFSLAPPFFSRQPSAKVLGSSRDGSLRGSVREGSLRGSIRTDSARLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST