Transcript Information: R_Transcript_298404.p1


Annotated TAIR IDAT3G18480.1
Annotated Gene NameCCAAT-displacement protein alternatively spliced product
Annotated Gene Symbol(s)AtCASP, CASP
Annotation TypeOrtholog
Chromosome Positionchr3:6336924-6341596 | Forward length=689
E-Value1.7E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3155287174572
Replicate 20
Replicate 30.61910101611223
Condition 2: 8 Hour
Replicate 10.66178013370933
Replicate 20.60434815786988
Replicate 30.81764011803545
Condition 3: 24 Hour
Replicate 10.82730836856591
Replicate 20.99348013020618
Replicate 30.19718652871079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_298404.p1 GENE.R_Transcript_298404~~R_Transcript_298404.p1 ORF type:5prime_partial len:111 (-),score=27.40 R_Transcript_298404:87-419(-)
GAGAGGGAGAAGGGACTACTACGTTCTCAGCTACAGTCTGCGAATGAGGAGAGTGATACTAAGAAAAGTGATACTTTTGATTCAAGCACCATTCTTGAGAACTCTTTGAGTGCAAAGGAGAAGATTATCTCTGAACTGAATATGGAACTTCATAATGTTGAAACAACCTTGTCTAATGAGAGGGAGCAACATATTAATGAAATTAAGAAACTGAATGCACTTCTCAATGAAAAGGTATGTGTGAAACTTGCCTCTACTTACATGAATTTTCTTCTGAGCGTTGTTTGTAGTTTATTTCTTACCTCTTCTTCTGCAAACCATTTTCTTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_298404.p1 GENE.R_Transcript_298404~~R_Transcript_298404.p1 ORF type:5prime_partial len:111 (-),score=27.40 R_Transcript_298404:87-419(-)
EREKGLLRSQLQSANEESDTKKSDTFDSSTILENSLSAKEKIISELNMELHNVETTLSNEREQHINEIKKLNALLNEKVCVKLASTYMNFLLSVVCSLFLTSSSANHFLF*

Click here to download the sequence:
Link to NCBI Protein BLAST