Transcript Information: R_Transcript_29887.p1


Annotated TAIR IDAT1G58030.1
Annotated Gene Namecationic amino acid transporter 2
Annotated Gene Symbol(s)CAT2
Annotation TypeOrtholog
Chromosome Positionchr1:21464185-21468141 | Reverse length=635
E-Value2.6E-267
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4932374997171
Replicate 22.3014494554121
Replicate 32.3949708785185
Condition 2: 8 Hour
Replicate 12.4774905511547
Replicate 23.0166451050503
Replicate 32.7548818816776
Condition 3: 24 Hour
Replicate 12.3615956844687
Replicate 21.97121200877
Replicate 32.9897202017516


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29887.p1 GENE.R_Transcript_29887~~R_Transcript_29887.p1 ORF type:complete len:593 (+),score=91.89,AA_permease_2|PF13520.2|9.1e-54,AA_permease_2|PF13520.2|84,AA_permease|PF00324.17|1e-37,AA_permease|PF00324.17|2.4e+03 R_Transcript_29887:340-2118(+)
ATGGGTTATAAAATTGGGAGTATGTTTAAGTGTTGGGTAAGGAGAAAACAAGTTGATTCTGTTGATGGCAATTGTTCCTCAACTGGGCAACCTCAGCTTGTCAGAGCTTTATCTGTTCCTCACATCACTGCTATTGGAATTGGAACAACCATTGGTGCTGGAGTGTATATACTGATTGGTACAGTGGCTAGAGAGTATACTGGACCAGCCCTCACTTTATCCTTTTTGTTTGCTGGCATAGCAGCTGGCCTATCTGCATTTTGCTATGCAGAGCTTGCCAGCCGGTGCCCTTCTGCAGGGAGTGCATATCATTACTTGTATGTATGTGTTGGGGAAGGTGTGGCATGGTTAATTGGCTGGTCATTAATGCTAGAGTATACAATTGGTGGCTCTGCAATCGCCCGTGGCATATCCCCAAATCTGGCCTTGCTCTTTGGCAGTGAGGACAGTCTGCCTAAATTTCCGGCTCGTCACTACATCCCAGCTCTTGATGTCATTGTTGATCCTTGTGCAGCGATTCTTATTGTTATTGTCACCATACTATTATGTCTTGGAATTAAAGAGAGTGCACTTGCAGAAGCTATTGTTACATCAGGAAATGTATGTGCCTTGATTTTCATCATAATTGCCGGTGGTTATCTGGGTTTCAAAACTGGCTGGACTGGATATGAGCTCTCCACTGGGTATTTCCCTTTTGGGGTAAATGGTGTGCTTGCTGGATCTGCAACAGTTTTTTTCTCATATATTGGTTTTGATGCTGTTGCAAGTACAGCTGAGGAGGTGAAGAATCCAAAACGAGATTTACCACTGGGTATAGCCCTGTCACTGTCCATATGCTGTGGACTTTACATGCTGGTGTCTGTTGTTGTAGTTGGGCTGATACCATATTATAAACTTGACCCGGACACTCCTATTACCTCTGCATTCTCCAGTCATGGCATGCAATGGGCAGCGTATATAATCACAGTGGGAGCATCAACAGCTCTATGTGCGTCTTTGCTGGGTTCTTTTCTTCCGCAGCCTCGAGTGCTCATGGCAATGGCTAGAGATGGTTTGCTGCCATCCTTTTTCTCTGACGTCAATCCATACACAAAAGTTCCTGTGAAGAGTACAATTGCAACTGGAGCTTTTGCTGCAGTATTAGCCTTTTTCATGGATGTTTCACAGCTGGCAGGAATGGTTAGTGTGGGAACTCTCCTTTCATTCACCGTGGTAGCCATATCTGTTCTAATAATTAGATATATTCCACCTGATGAGGTGCCGCTTCCATCATCACTTCCAGATTCAATAAGGGCATCTGAGAGGATCGATGGCACAAGTCTTGATGAAGATGTTGGCACTTCAAAGGACGTGGTCCAACCTCTACTTCATTATGGCATGGATCCACTGATGTTAAAGCAATCTGCTGAATGCAGTACAACTTCAAGTGACGAGAAGAGGCGAAAAATTGCCGGCTGGAGCATACTGCTTACGTGTATCGGAGCGCTTCTTCTCACTATTGAAGCTTCTGATGTGACCTTTCCCAGTATTCCTCGGTTTACAATATGTGCGATAGGTGCTGCTCTTTTGATATCCAGTTTGGTAGTCCTCTCCTGCATTAATCAAGATGACGCCAGGCACAGCTTTGGTCACACAGGAGAGCTGACACTTGGGTTCGTGTGCTCGTATGGTTGGCAATTGGAGTCCTTATTTATGCATTCTATGGGCGTCGTCATAGTGCGTTGCGAGATGCAGTTTATGTGCCTGCTGCCCTTGCAGACGAGATCCATCGCAGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29887.p1 GENE.R_Transcript_29887~~R_Transcript_29887.p1 ORF type:complete len:593 (+),score=91.89,AA_permease_2|PF13520.2|9.1e-54,AA_permease_2|PF13520.2|84,AA_permease|PF00324.17|1e-37,AA_permease|PF00324.17|2.4e+03 R_Transcript_29887:340-2118(+)
MGYKIGSMFKCWVRRKQVDSVDGNCSSTGQPQLVRALSVPHITAIGIGTTIGAGVYILIGTVAREYTGPALTLSFLFAGIAAGLSAFCYAELASRCPSAGSAYHYLYVCVGEGVAWLIGWSLMLEYTIGGSAIARGISPNLALLFGSEDSLPKFPARHYIPALDVIVDPCAAILIVIVTILLCLGIKESALAEAIVTSGNVCALIFIIIAGGYLGFKTGWTGYELSTGYFPFGVNGVLAGSATVFFSYIGFDAVASTAEEVKNPKRDLPLGIALSLSICCGLYMLVSVVVVGLIPYYKLDPDTPITSAFSSHGMQWAAYIITVGASTALCASLLGSFLPQPRVLMAMARDGLLPSFFSDVNPYTKVPVKSTIATGAFAAVLAFFMDVSQLAGMVSVGTLLSFTVVAISVLIIRYIPPDEVPLPSSLPDSIRASERIDGTSLDEDVGTSKDVVQPLLHYGMDPLMLKQSAECSTTSSDEKRRKIAGWSILLTCIGALLLTIEASDVTFPSIPRFTICAIGAALLISSLVVLSCINQDDARHSFGHTGELTLGFVCSYGWQLESLFMHSMGVVIVRCEMQFMCLLPLQTRSIAD*

Click here to download the sequence:
Link to NCBI Protein BLAST