Transcript Information: R_Transcript_29889.p1


Annotated TAIR IDAT1G58030.1
Annotated Gene Namecationic amino acid transporter 2
Annotated Gene Symbol(s)CAT2
Annotation TypeOrtholog
Chromosome Positionchr1:21464185-21468141 | Reverse length=635
E-Value6.7E-306
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.272217195004
Replicate 28.0884624396654
Replicate 39.6700994988573
Condition 2: 8 Hour
Replicate 15.3845320991534
Replicate 28.0757598944892
Replicate 38.0706198103486
Condition 3: 24 Hour
Replicate 17.2595313384554
Replicate 24.2128022599979
Replicate 36.3238954151549


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29889.p1 GENE.R_Transcript_29889~~R_Transcript_29889.p1 ORF type:complete len:623 (+),score=105.56,AA_permease_2|PF13520.2|1.1e-53,AA_permease_2|PF13520.2|86,AA_permease|PF00324.17|1.2e-37,AA_permease|PF00324.17|1.5e+03,AA_permease_C|PF13906.2|7e+02,AA_permease_C|PF13906.2|5.9e+02,AA_permease_C|PF13906.2|1.7e-22 R_Transcript_29889:340-2208(+)
ATGGGTTATAAAATTGGGAGTATGTTTAAGTGTTGGGTAAGGAGAAAACAAGTTGATTCTGTTGATGGCAATTGTTCCTCAACTGGGCAACCTCAGCTTGTCAGAGCTTTATCTGTTCCTCACATCACTGCTATTGGAATTGGAACAACCATTGGTGCTGGAGTGTATATACTGATTGGTACAGTGGCTAGAGAGTATACTGGACCAGCCCTCACTTTATCCTTTTTGTTTGCTGGCATAGCAGCTGGCCTATCTGCATTTTGCTATGCAGAGCTTGCCAGCCGGTGCCCTTCTGCAGGGAGTGCATATCATTACTTGTATGTATGTGTTGGGGAAGGTGTGGCATGGTTAATTGGCTGGTCATTAATGCTAGAGTATACAATTGGTGGCTCTGCAATCGCCCGTGGCATATCCCCAAATCTGGCCTTGCTCTTTGGCAGTGAGGACAGTCTGCCTAAATTTCCGGCTCGTCACTACATCCCAGCTCTTGATGTCATTGTTGATCCTTGTGCAGCGATTCTTATTGTTATTGTCACCATACTATTATGTCTTGGAATTAAAGAGAGTGCACTTGCAGAAGCTATTGTTACATCAGGAAATGTATGTGCCTTGATTTTCATCATAATTGCCGGTGGTTATCTGGGTTTCAAAACTGGCTGGACTGGATATGAGCTCTCCACTGGGTATTTCCCTTTTGGGGTAAATGGTGTGCTTGCTGGATCTGCAACAGTTTTTTTCTCATATATTGGTTTTGATGCTGTTGCAAGTACAGCTGAGGAGGTGAAGAATCCAAAACGAGATTTACCACTGGGTATAGCCCTGTCACTGTCCATATGCTGTGGACTTTACATGCTGGTGTCTGTTGTTGTAGTTGGGCTGATACCATATTATAAACTTGACCCGGACACTCCTATTACCTCTGCATTCTCCAGTCATGGCATGCAATGGGCAGCGTATATAATCACAGTGGGAGCATCAACAGCTCTATGTGCGTCTTTGCTGGGTTCTTTTCTTCCGCAGCCTCGAGTGCTCATGGCAATGGCTAGAGATGGTTTGCTGCCATCCTTTTTCTCTGACGTCAATCCATACACAAAAGTTCCTGTGAAGAGTACAATTGCAACTGGAGCTTTTGCTGCAGTATTAGCCTTTTTCATGGATGTTTCACAGCTGGCAGGAATGGTTAGTGTGGGAACTCTCCTTTCATTCACCGTGGTAGCCATATCTGTTCTAATAATTAGATATATTCCACCTGATGAGGTGCCGCTTCCATCATCACTTCCAGATTCAATAAGGGCATCTGAGAGGATCGATGGCACAAGTCTTGATGAAGATGTTGGCACTTCAAAGGACGTGGTCCAACCTCTACTTCATTATGGCATGGATCCACTGATGTTAAAGCAATCTGCTGAATGCAGTACAACTTCAAGTGACGAGAAGAGGCGAAAAATTGCCGGCTGGAGCATACTGCTTACGTGTATCGGAGCGCTTCTTCTCACTATTGAAGCTTCTGATGTGACCTTTCCCAGTATTCCTCGGTTTACAATATGTGCGATAGGTGCTGCTCTTTTGATATCCAGTTTGGTAGTCCTCTCCTGCATTAATCAAGATGACGCCAGGCACAGCTTTGGTCACACAGGAGGTTTCCTTTGTCCATTTGTTCCACTGCTACCTGTTGCTTCCATTCTCATCAATGTATACTTGCTGGTGAATCTTGGAGCTGACACTTGGGTTCGTGTGCTCGTATGGTTGGCAATTGGAGTCCTTATTTATGCATTCTATGGGCGTCGTCATAGTGCGTTGCGAGATGCAGTTTATGTGCCTGCTGCCCTAGCAGATGAGATCCATCGCAGATTACGTAGTAGTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29889.p1 GENE.R_Transcript_29889~~R_Transcript_29889.p1 ORF type:complete len:623 (+),score=105.56,AA_permease_2|PF13520.2|1.1e-53,AA_permease_2|PF13520.2|86,AA_permease|PF00324.17|1.2e-37,AA_permease|PF00324.17|1.5e+03,AA_permease_C|PF13906.2|7e+02,AA_permease_C|PF13906.2|5.9e+02,AA_permease_C|PF13906.2|1.7e-22 R_Transcript_29889:340-2208(+)
MGYKIGSMFKCWVRRKQVDSVDGNCSSTGQPQLVRALSVPHITAIGIGTTIGAGVYILIGTVAREYTGPALTLSFLFAGIAAGLSAFCYAELASRCPSAGSAYHYLYVCVGEGVAWLIGWSLMLEYTIGGSAIARGISPNLALLFGSEDSLPKFPARHYIPALDVIVDPCAAILIVIVTILLCLGIKESALAEAIVTSGNVCALIFIIIAGGYLGFKTGWTGYELSTGYFPFGVNGVLAGSATVFFSYIGFDAVASTAEEVKNPKRDLPLGIALSLSICCGLYMLVSVVVVGLIPYYKLDPDTPITSAFSSHGMQWAAYIITVGASTALCASLLGSFLPQPRVLMAMARDGLLPSFFSDVNPYTKVPVKSTIATGAFAAVLAFFMDVSQLAGMVSVGTLLSFTVVAISVLIIRYIPPDEVPLPSSLPDSIRASERIDGTSLDEDVGTSKDVVQPLLHYGMDPLMLKQSAECSTTSSDEKRRKIAGWSILLTCIGALLLTIEASDVTFPSIPRFTICAIGAALLISSLVVLSCINQDDARHSFGHTGGFLCPFVPLLPVASILINVYLLVNLGADTWVRVLVWLAIGVLIYAFYGRRHSALRDAVYVPAALADEIHRRLRSSI*

Click here to download the sequence:
Link to NCBI Protein BLAST