Transcript Information: R_Transcript_298973.p1


Annotated TAIR IDAT1G66890.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24957614-24958090 | Forward length=158
E-Value3.6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.152112961568
Replicate 220.268105026137
Replicate 324.892870913738
Condition 2: 8 Hour
Replicate 120.947445157181
Replicate 222.87789645023
Replicate 321.194366157909
Condition 3: 24 Hour
Replicate 127.337042132411
Replicate 226.134844350106
Replicate 330.111408760009


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_298973.p1 GENE.R_Transcript_298973~~R_Transcript_298973.p1 ORF type:complete len:173 (-),score=0.90 R_Transcript_298973:217-735(-)
ATGGCCACGTTGCAGAAATTCAAGCTGCTAGCCACACAGTGCGCCGTCATCGGGAGCCCGGCCCGAAGCCCAACCACAAGCCCCGTCATCCACATCCGACGTCGTAAAACCCTCCGTATGCTTCTCAGCCGTCGCACCACTAACAACGCCGACGTTTTCCACCGCCGATTCCTCCACCCTAACCCTCGCCCTGACAAAACTTCCCTCCAAAAGCGCCCACCGGAGACCGCCAAAGATAACAACCTCGGCGTCCGTCTCAAGCTTAAGGATCTCTTCGTCTCCTCTCCTCCTCCACCGCCGATCATCGGTGATAATTCCAGCAAGGTTCCAGAAGAAGACGATGGACAGAGGCTGTTACCTGCTACCGGAACTTCCTCCGCCGGTGGATTAGAGGTGGCGCGTAGAGTTCCCGGCGGTGGCGCGTCGATTAGGCCGTTATCGGCCACTTTAAGGCAGAGATTGCTTATGAGGAGAATGTGGCGGCCTGTACTCGTCGCGATTCCCGAGCAATCGCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_298973.p1 GENE.R_Transcript_298973~~R_Transcript_298973.p1 ORF type:complete len:173 (-),score=0.90 R_Transcript_298973:217-735(-)
MATLQKFKLLATQCAVIGSPARSPTTSPVIHIRRRKTLRMLLSRRTTNNADVFHRRFLHPNPRPDKTSLQKRPPETAKDNNLGVRLKLKDLFVSSPPPPPIIGDNSSKVPEEDDGQRLLPATGTSSAGGLEVARRVPGGGASIRPLSATLRQRLLMRRMWRPVLVAIPEQSP*

Click here to download the sequence:
Link to NCBI Protein BLAST