Transcript Information: R_Transcript_29905.p1


Annotated TAIR IDAT4G29080.1
Annotated Gene Namephytochrome-associated protein 2
Annotated Gene Symbol(s)PAP2, IAA27
Annotation TypeOrtholog
Chromosome Positionchr4:14323665-14325213 | Reverse length=305
E-Value7.2E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.596305915016
Replicate 29.4867005203207
Replicate 317.579589317978
Condition 2: 8 Hour
Replicate 113.829226049939
Replicate 214.560574222167
Replicate 312.422696969434
Condition 3: 24 Hour
Replicate 125.703591480851
Replicate 29.3789805248967
Replicate 325.232669522769


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29905.p1 GENE.R_Transcript_29905~~R_Transcript_29905.p1 ORF type:complete len:301 (+),score=87.30,AUX_IAA|PF02309.12|2.6e-77 R_Transcript_29905:268-1170(+)
ATGTCAAGGGCCTTAAAAGAACATGATTACATAGGCTTATCAGAGGTTTCTTCAAATGAACAAACCTCTGACAAGTCCAAAATAACTTCAAATTTGAGTGAGAAAACCAGCAAAGGTCTCAACTTGAAGGCAACTGAGCTTAGGCTTGGCTTGCCAAGTTCAGAATCCCCTGAAAGAGTTCATCTTGATGATGATAATGGTGTTAATTACCCACTCTGTGTAGCCAAGAATTTTGTGTCTGGTGCTAAAAGGGGCTTCTCTGATGCCATCAATGGAGAATCTGGCAAGTGGGTTTTCTCTATAAATGGTGGATCTGAAATGGATTCTCTGAAAAATGGTGTTTCTATGCCTTCCTCTGTTGTGGGAGATGACGATAAAAAGTTGCAGTTACAGAGTTCCCCTGTTTCTGGACAGGGCACAGCTACTCATGATTCTTCTAAGGCACAGGTTGTAGGATGGCCACCCATTCGATCATTTCGGAAGAATTCCATGGCTGTCAGTACCCCAAAAGTCTCTGACAACAAAGACTGCAAGTTGGAATCAGGGTGCCTTTTTGTAAAGGTCAGTATGGATGGTGCTCCGTACCTTAGGAAAGTTGATCTCAGAACCTATGGCAGTTATGTGGAGCTTTCCTCAGCCCTTGAGAAAATGTTCAGTGGCTTTACTGTTGGTGGTCAAACTGGAAATCAAGGAGTTCAAGGGCAAGATAAGTTGATCAGTAAGGGTACATTGATGGATGATCTTCACCGATCTGAACATGTTCTTACTTATGAAGACAAAGATGGCGACTGGATGCTTGTTGGTGACGTTCCATGGAACATGTTCATGGATTCTTGCAGAAGGCTGAGGATCATGAAGAGTTCAGAGGCAGCTGGCCTAGCATCAAGAGCGTCTGAGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29905.p1 GENE.R_Transcript_29905~~R_Transcript_29905.p1 ORF type:complete len:301 (+),score=87.30,AUX_IAA|PF02309.12|2.6e-77 R_Transcript_29905:268-1170(+)
MSRALKEHDYIGLSEVSSNEQTSDKSKITSNLSEKTSKGLNLKATELRLGLPSSESPERVHLDDDNGVNYPLCVAKNFVSGAKRGFSDAINGESGKWVFSINGGSEMDSLKNGVSMPSSVVGDDDKKLQLQSSPVSGQGTATHDSSKAQVVGWPPIRSFRKNSMAVSTPKVSDNKDCKLESGCLFVKVSMDGAPYLRKVDLRTYGSYVELSSALEKMFSGFTVGGQTGNQGVQGQDKLISKGTLMDDLHRSEHVLTYEDKDGDWMLVGDVPWNMFMDSCRRLRIMKSSEAAGLASRASEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST