Transcript Information: R_Transcript_299489.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.733311412001
Replicate 22.1316041031775
Replicate 32.5581128279967
Condition 2: 8 Hour
Replicate 12.7966089406752
Replicate 22.7241683461343
Replicate 33.6856062173375
Condition 3: 24 Hour
Replicate 12.8551587668972
Replicate 22.2391125777236
Replicate 33.3887055479714


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_299489.p1 GENE.R_Transcript_299489~~R_Transcript_299489.p1 ORF type:complete len:394 (+),score=43.72,RVT_1|PF00078.23|1.5e-19,zf-RVT|PF13966.2|4.1e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|2.5e-06 R_Transcript_299489:1356-2537(+)
ATGATGGGTCTTGGTTTCCCTGATAACTTTGTTAGATGGATCAATGCTTGTGTCACTGCTACTAGTTTCCAACTCAGCATAAATGGCTCCTTACATGAACACTTCAGAGGTGGAAAGGGTATTAGACAGGGTGACCCCATATCACCCTTATTATTTGTAATGGTGATGGAATACCTGACTAGGATTTTGAAGCATAAAAGCACAGCTCCTGATTTCAGATATCACCCATTATGCAAATCTATTGGCCTTACTAGCCTTTGTTTTGCTGATGAGTTAATGATGTTTTGCAAGGCTGACATTAAGTCTATAAAGCATATTATGGATGGTTTTAATACCTTCTCTGAAGCTACTAGACTTGAGGCTAATTTGCATAAGTCTCATATTTATTTGGGAGGTGTTACAAACACTCTGAAACATGAGATTATCAGAGCCACTAGTTTTGCAGAAGGAATATTGCCTATGAAATACCTTGGTATGCCTTTATCTGCCACAAAATGGAACAAGGTTGAGTGCCAGTTCTTAATTGATCATATAATCAAAAGGATCAACTCCTGGGGCGGTAGGAATTTATCATTGGCTGGAAGGGCTCAACTCATCAAGTCTGTCCTGTATTCATTACATATCTACTGGGCTTCTATCTTTGTGATTCCTTCTAGTATTATTAAGCTTATTGAACATCATTGTAGAAGATTTTTATGGGACCAACATGCTGAATGTAAAAAGATACCTTTAGTGGCTTGGAAGAAGGTGTGTCTGCCCAAGAGTTATGGTGGTTTGAGTGTGACGAAATGCACTGTTTGGAATAAGGCTGCAATAGCTAAACATCTATGGGAAATCATGCAAAAGAAGGATTGTTTATGGGTGAAATGGGTCAATGGAATTTATCTCAAGGGGGCCTCCATATATCAATATACCTGCCCTGTTGATTGTGCTTGGTATTGGAAGAAAATCAGTAAACTTGCTCAACTTGCTGAATTTCAACCACACAACTGGCCTGTGAATGAAGAGGGGCAGTACACAATTACATTGGGCTATAAGCACTTGTTGGGAGATCAAGTTAAAGATAACCTTTCCAGAATCATTTGGGGAAAGTATAGTGTTCCAAAACATGCTATATATCTATGGTTGATAGCTCAAAACAGAATACTAACAAGGGATAGGCTATCACATATGCAGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_299489.p1 GENE.R_Transcript_299489~~R_Transcript_299489.p1 ORF type:complete len:394 (+),score=43.72,RVT_1|PF00078.23|1.5e-19,zf-RVT|PF13966.2|4.1e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|2.5e-06 R_Transcript_299489:1356-2537(+)
MMGLGFPDNFVRWINACVTATSFQLSINGSLHEHFRGGKGIRQGDPISPLLFVMVMEYLTRILKHKSTAPDFRYHPLCKSIGLTSLCFADELMMFCKADIKSIKHIMDGFNTFSEATRLEANLHKSHIYLGGVTNTLKHEIIRATSFAEGILPMKYLGMPLSATKWNKVECQFLIDHIIKRINSWGGRNLSLAGRAQLIKSVLYSLHIYWASIFVIPSSIIKLIEHHCRRFLWDQHAECKKIPLVAWKKVCLPKSYGGLSVTKCTVWNKAAIAKHLWEIMQKKDCLWVKWVNGIYLKGASIYQYTCPVDCAWYWKKISKLAQLAEFQPHNWPVNEEGQYTITLGYKHLLGDQVKDNLSRIIWGKYSVPKHAIYLWLIAQNRILTRDRLSHMQV*

Click here to download the sequence:
Link to NCBI Protein BLAST