Transcript Information: R_Transcript_29977.p1


Annotated TAIR IDAT5G45290.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18350011-18352092 | Reverse length=546
E-Value4.7E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.159195744335
Replicate 211.217201592269
Replicate 314.826621252304
Condition 2: 8 Hour
Replicate 115.764871952336
Replicate 215.660275125077
Replicate 321.539496849192
Condition 3: 24 Hour
Replicate 122.407448835259
Replicate 218.240907609844
Replicate 322.374930989859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_29977.p1 GENE.R_Transcript_29977~~R_Transcript_29977.p1 ORF type:complete len:584 (+),score=102.11,zf-RING_2|PF13639.2|5.6e-13,zf-RING_11|PF17123.1|4.3e-09,zf-rbx1|PF12678.3|2.2e-08,zf-C3HC4|PF00097.21|4.6e-08,zf-RING_5|PF14634.2|9.4e-06 R_Transcript_29977:534-2285(+)
ATGGGATCTTCAAGCAGTAAAACGCGTCGTTCTGGGGGTGGTGATGCTGTTAGTGTTGCGTCGTATTCTTCTTCCCCAGCTTCCTCGTTTTCATCGTCAGTTGCTGCCAGTACCAGTACTGGTAGTAGTAGTAGTATTCGAAGGAGAAAAGTCGGTAAAAGTGGAGGGGTTTTCAGTTCTGCTTGTCTTGGATCTTCTTCTAAAACTTTCGACTCTGACGATGATGACGAGATTTCAGAGCATCATGATGAAATGGGCAGCGGTCGAGTACAGCGGACTGAAGCAGGGTCTGATGAAGTCAAAGTTGAGTGTTACAGAACTGCTAAAAGTGATAGATCTGACGAAATGCCCTGTGTATCATCTAATGTTGAGCTTGGTGAATGGAGTCATGCAAGCAGAGCGGACAGCATTACCAGGCCAGGTGGAAGCTCATCTGAAGCTTTCTCTAGCCGATCTTTGAACCGCTCTGGACGATTTTTGTCTCGCTTCAGTTTTGTTCCTGGGAGTGTTAGTTTTAGGCTGAGTAGAGCTGCCAGTGTAGGTTCATCAAGGGCTTATCCTTCTTCTCCCACAAGTTTTGCTATTTCTAGTGGTGAAGACCACCGTTATTTGCATGGAGGTTGTCCACATGGCTTGATTAGCAGAAACGAGAACCAACCCAGTGAAAATCTGAATTCTTCATGCCATTCCAGCTCATCTGTTAGATCTCGTAATGGTAATTCTTCTATTAATTTATCACGGAATGCTGCAGCTTCTACTTTATCTAGTTCATTGCAAGACAACCAGATTATGTCTGCCCAAGACTTGGTGGATATTGACAGTGAAAGAACTAGGTCTGATGCTTGTTTTCCCCCTTTTGGAAGTCATACGGATGTAGAAAGTCTAAACAGGAGAACCAGTGACCGTCGAAATGGTGCCAGAGAACATGTGGATCGCAATGTTCGTTTTAGTAGAACTCTAAGTGTTGGAAGGCTGCGTGACAGGGTTCTCCGATGGTCATCGTTTTCAGACTTGACTCTTTCTCCATTGCCGCAGGAGAGAACAGCTTCCAATGCAAATCGTGTTAATTCTCTGGCGTCTTCTCCATACTCTCTGCCTGGTATGCCTCGCTCTTTCTATTCTAGTCAAAATAATGACGTTGAGACATCACATCCAAGAGAAGCCCGGCATCCTGATTTACTGGAGCATAGATCAAATTTCTTGGAACGTCGAAGAAGAATAAGATCTCAGGTACGGGCTCTTCAGCGTTTAGGTAGCCGCTTTGAGACTTTATCAGGGCATGAAAGGTACTGTATTCTATCAGGGCAACATCGAACTGGACGTTGCTCTTGTCGTATCAATACTAGGGATTCAAATTCAAATGATGATGGTGGTGCTCGTGCTAGCATATCAAGAATCGTTGTGCTAGCTGAAGCTCTGTTTGAGGTTCTGGATGAAATTCATCAACAATCAGTGGTCTTATCTTCCCGACCTTCTGTTTCTTCAATTGGATCAGTCCCTGCACCCAATGAAGTTGTTGAATCATTGCCTGTAAAAGTATACAATAAGTCCACAAAATTCCAATGTGAGGAGGCTGCACAATGTTACATATGCCTTGTGGAGTATGAGGAAGGAGATGAGATGCGCATATTACCTTGTCATCATGAATTTCATAAGAATTGCATTGACAAGTGGCTTAAGGAAATTCACAGGGTATGCCCACTTTGTCGTAGGGACGTATGCAGATCTGACTCATCGTCTCTAGAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_29977.p1 GENE.R_Transcript_29977~~R_Transcript_29977.p1 ORF type:complete len:584 (+),score=102.11,zf-RING_2|PF13639.2|5.6e-13,zf-RING_11|PF17123.1|4.3e-09,zf-rbx1|PF12678.3|2.2e-08,zf-C3HC4|PF00097.21|4.6e-08,zf-RING_5|PF14634.2|9.4e-06 R_Transcript_29977:534-2285(+)
MGSSSSKTRRSGGGDAVSVASYSSSPASSFSSSVAASTSTGSSSSIRRRKVGKSGGVFSSACLGSSSKTFDSDDDDEISEHHDEMGSGRVQRTEAGSDEVKVECYRTAKSDRSDEMPCVSSNVELGEWSHASRADSITRPGGSSSEAFSSRSLNRSGRFLSRFSFVPGSVSFRLSRAASVGSSRAYPSSPTSFAISSGEDHRYLHGGCPHGLISRNENQPSENLNSSCHSSSSVRSRNGNSSINLSRNAAASTLSSSLQDNQIMSAQDLVDIDSERTRSDACFPPFGSHTDVESLNRRTSDRRNGAREHVDRNVRFSRTLSVGRLRDRVLRWSSFSDLTLSPLPQERTASNANRVNSLASSPYSLPGMPRSFYSSQNNDVETSHPREARHPDLLEHRSNFLERRRRIRSQVRALQRLGSRFETLSGHERYCILSGQHRTGRCSCRINTRDSNSNDDGGARASISRIVVLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPNEVVESLPVKVYNKSTKFQCEEAAQCYICLVEYEEGDEMRILPCHHEFHKNCIDKWLKEIHRVCPLCRRDVCRSDSSSLES*

Click here to download the sequence:
Link to NCBI Protein BLAST