Transcript Information: R_Transcript_299927.p1


Annotated TAIR IDAT5G43310.1
Annotated Gene NameCOP1-interacting protein-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17379735-17385387 | Reverse length=1237
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9088063743497
Replicate 22.1956915468024
Replicate 33.4434965013824
Condition 2: 8 Hour
Replicate 11.4403449968968
Replicate 22.7768415358335
Replicate 31.8982076465764
Condition 3: 24 Hour
Replicate 13.1510715802731
Replicate 21.7298242267119
Replicate 31.1444551470273


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_299927.p1 GENE.R_Transcript_299927~~R_Transcript_299927.p1 ORF type:internal len:153 (-),score=37.68 R_Transcript_299927:3-458(-)
ACCAAAACAATCTTTTCAACTACAGTGTTGTCATCTCTAGAGGATCCCTGCATGGTTAAGTCGAACTATGGGAAGGCACCTCCAACAAGCTTAGAGATGGCAGCAGCCAGTGTAGAGACCACCACGATTAATGTATCTGATGGTCAGAGGCAAAACATAGTTAAGATATCCGAAGTTGTTTCAGAGAAGCAACAAGGAAAGGAATCATCGAAAGGTTTCCGGCGGCTATTGAAGTTCGGGAAGAGAAGTTCAGCTGCAAGTGGATCTAATGTAGAGTCAGATAAAGCAAGTCTTGATGGCTCTGTGGCTGATGATAGTGCATTGAATAGCTCTTCCAGTGAAGTTTTTACCTTGAAGAACCTTCTCACTCAAGAGGAAAGTTCCAGTACAGGCACTACTCCAAAGAAGTCTTCTCGATCTTTCTCGATACTGTCACCCTTCAAAAGCAAGAACAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_299927.p1 GENE.R_Transcript_299927~~R_Transcript_299927.p1 ORF type:internal len:153 (-),score=37.68 R_Transcript_299927:3-458(-)
TKTIFSTTVLSSLEDPCMVKSNYGKAPPTSLEMAAASVETTTINVSDGQRQNIVKISEVVSEKQQGKESSKGFRRLLKFGKRSSAASGSNVESDKASLDGSVADDSALNSSSSEVFTLKNLLTQEESSSTGTTPKKSSRSFSILSPFKSKNS

Click here to download the sequence:
Link to NCBI Protein BLAST