Transcript Information: R_Transcript_299941.p1


Annotated TAIR IDAT3G52240.1
Annotated Gene Nameunknown protein; Has 220 Blast hits to 193 proteins in 66 species: Archae - 0; Bacteria - 15; Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19372902-19375799 | Reverse length=680
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9291747350516
Replicate 20.68280651760319
Replicate 31.4898691119449
Condition 2: 8 Hour
Replicate 12.1897928001601
Replicate 20.90897893663356
Replicate 33.3942036119423
Condition 3: 24 Hour
Replicate 13.3596791064933
Replicate 21.2551773352361
Replicate 31.7794881859266


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_299941.p1 GENE.R_Transcript_299941~~R_Transcript_299941.p1 ORF type:5prime_partial len:123 (-),score=29.39 R_Transcript_299941:77-445(-)
GCCACAGTTGAGGAGACACGACATGACTCGGCCAAGTCTGATGGTCAGGAAAATGATACTGTGAACTCTTCAGATAATCTTGCATATTGCTTGGACACTGGGAGTGAGGAATCAGAACGATGTCCTGATAAAAGGGTTGAAAAATGTTTCCAGAGGAGTGAAGTTTCTCCTTCACTACTAGCTCAAACACAAGAATGTGATGCCAGTACTTCTAATCATGATAATCAAAGCCGTGGAGCAATGGAAAGAGCTATTGAACATCAAACCGAGCTTATAGGGTGCTATGAAGCTCAAGAAAAAGCTCAAATGGACTGGGAAGAGAAATACGCAGAGAATAACACTAGTACACCGGTATGCTTTCTCCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_299941.p1 GENE.R_Transcript_299941~~R_Transcript_299941.p1 ORF type:5prime_partial len:123 (-),score=29.39 R_Transcript_299941:77-445(-)
ATVEETRHDSAKSDGQENDTVNSSDNLAYCLDTGSEESERCPDKRVEKCFQRSEVSPSLLAQTQECDASTSNHDNQSRGAMERAIEHQTELIGCYEAQEKAQMDWEEKYAENNTSTPVCFLH*

Click here to download the sequence:
Link to NCBI Protein BLAST