Transcript Information: R_Transcript_300076.p1


Annotated TAIR IDAT4G36630.1
Annotated Gene NameVacuolar sorting protein 39
Annotated Gene Symbol(s)EMB2754
Annotation TypeHomolog
Chromosome Positionchr4:17272088-17276524 | Reverse length=1000
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57945907792758
Replicate 20
Replicate 30.54539851419411
Condition 2: 8 Hour
Replicate 10.58299678445822
Replicate 20.17746731619989
Replicate 30.1440604017491
Condition 3: 24 Hour
Replicate 10.18220481926749
Replicate 20.1750417372268
Replicate 30.52113582587851


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_300076.p1 GENE.R_Transcript_300076~~R_Transcript_300076.p1 ORF type:internal len:126 (+),score=30.44,Vps39_1|PF10366.5|3.1e-15,Clathrin|PF00637.16|3.2e-06 R_Transcript_300076:2-376(+)
ATTAAGTTCTTGCAGAAGAAAAGATTTAACATTATTGAAAAGGCAGCAGCAGAAGGAACAGATGAGGCTGTTTTTGATGCTATTGGTGCTAACTTTATATCTTTCAACTCCCATGGGGCCAAAAAATCAAATAAGGGTCGTGGTAGCATCCCCATAAGTTCAGGTGGTCGTGAGAGAGCTGCTATACTGGACACTGCTCTTATCCAAGCTCTCATTCTTACAGGGCAGTCTTCTGCTGCCGTGGAATTATTGAAAGGTCTTAACTACTGTGACTTGAAAATATCTGAGGAGTTCTTGCAGAAAAGAAATCATTATACTGCGTTGCTGGAATTATACAAGTGCAACACTATGCACCATGAAGCTTTAAAGCTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_300076.p1 GENE.R_Transcript_300076~~R_Transcript_300076.p1 ORF type:internal len:126 (+),score=30.44,Vps39_1|PF10366.5|3.1e-15,Clathrin|PF00637.16|3.2e-06 R_Transcript_300076:2-376(+)
IKFLQKKRFNIIEKAAAEGTDEAVFDAIGANFISFNSHGAKKSNKGRGSIPISSGGRERAAILDTALIQALILTGQSSAAVELLKGLNYCDLKISEEFLQKRNHYTALLELYKCNTMHHEALKLL

Click here to download the sequence:
Link to NCBI Protein BLAST