Transcript Information: R_Transcript_300293.p1


Annotated TAIR IDAT2G31240.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13317570-13319518 | Reverse length=617
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5586019790557
Replicate 20.4382529498658
Replicate 30.086932590497732
Condition 2: 8 Hour
Replicate 10.13938822550614
Replicate 20.16972206331071
Replicate 30.37887612300618
Condition 3: 24 Hour
Replicate 10
Replicate 20.041850586130128
Replicate 30.1661305858588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_300293.p1 GENE.R_Transcript_300293~~R_Transcript_300293.p1 ORF type:complete len:527 (+),score=127.69,TPR_12|PF13424.2|4e-08,TPR_12|PF13424.2|7.8e-09,TPR_12|PF13424.2|1.4e-07,TPR_12|PF13424.2|17,TPR_12|PF13424.2|78,TPR_2|PF07719.13|0.017,TPR_2|PF07719.13|38,TPR_2|PF07719.13|0.0045,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|1.8e+02,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|1.2e+03,TPR_8|PF13181.2|0.2,TPR_8|PF13181.2|3.9,TPR_8|PF13181.2|0.0013,TPR_8|PF13181.2|26,TPR_8|PF13181.2|2.4,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|65,TPR_11|PF13414.2|0.021,TPR_11|PF13414.2|0.00017,TPR_11|PF13414.2|4e-06,TPR_11|PF13414.2|0.2,TPR_11|PF13414.2|3e+02,TPR_11|PF13414.2|11,TPR_10|PF13374.2|66,TPR_10|PF13374.2|6.1,TPR_10|PF13374.2|3.2,TPR_10|PF13374.2|96,TPR_10|PF13374.2|55,TPR_10|PF13374.2|4e+03,TPR_10|PF13374.2|52,TPR_19|PF14559.2|0.0052,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.4,TPR_19|PF14559.2|4.3,TPR_19|PF14559.2|28,TPR_1|PF00515.24|12,TPR_1|PF00515.24|6.3,TPR_1|PF00515.24|0.0096,TPR_1|PF00515.24|0.54,TPR_1|PF00515.24|2.6e+03,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|8.4e+03,ANAPC3|PF12895.3|0.15,ANAPC3|PF12895.3|1.5,ANAPC3|PF12895.3|4.8,TPR_7|PF13176.2|1.2e+02,TPR_7|PF13176.2|27,TPR_7|PF13176.2|1.9,TPR_7|PF13176.2|8.3e+02,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|3.8e+03,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|18,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|3.5e+02 R_Transcript_300293:176-1582(+)
ATGGATGATGAGAACCAAGCAGATGAAAACTCTGCAGAATGGGAAATGTTGATCACCAGAGCAGAATCTTTGAAACACAAAGGAAAATTCGCAGAATCTGACAGCTGTTTCGAGAAGGCATACGAGCTCATGAAAAACTCATTTGACAAAGATCACTCCTTCATCGCATTGTTGTTTGCATCTTGGGCACCAGTCTTGACCTTCCTCAAGAAATATCAAAAAGCAGAAGAGATCTTGAAAAAATCTTTGCAAATTCTTTCCAAGGAGGATGAGGTTCCTATGGAGCAACTCGTAGAAATCTACTCCAATCTTGGAGAAATCTGCATCAAGACCAAGAAATTCGATGAGGCAAAGAACTACTTGCAATTGTCCATCGACAAGGCAGAGGATAAGGACAGCAATCCTAATGTGGGAGTCAGCAAAATGAACATGGCAGAAGTCATGTTCCAAGAAAAGAAATACAACGAAGTGATCCAATTCTGCAGAGAAGCTATCGATATCTTCAAGCAACATTTGGACCCATTGCATCCTGTCATCCTCCAAACTCAATTGAAGATTGTCTCTGTCTACATTGAACAAGGAGACATTGATGCAGCAGATGAGCGATTCGAAGAAGTCTGCAAAAGCCAAAGTGCAGAGCAAGATAGCCCTACCTATTCCCTCTTGATGCAACAAAGAGCTAATGCCAACTATGAATTCGAATTGTATGATAAGGCTAAACGTCTCTATCTTGACTGCATTGACAAGGTTGGAAACAACTCTTTGTCTTGCCACTTCAAGAACGAATACTCTTGCCTCTTGAGAACTATTGGCGAGATCGAGGAGGCTGAGAAGCTTTTGCTCGAAATCAGACAAGAGAGCGAGAAATCTCCTACCTCTCCTCTCTCCATCTCCAAATACTTCCAAGTCTTGAATCCTCAACAATTCACTGTCACTTACACTGAAAAGACTGATAACAAGAAGCCATGGCCTGTTTGGGCATCCTACAAGCTTCTTCTCCAAGTTAAGAGACATCCTAAGGATAAAACCCCTAGATTGAGAGTTGGAAACATTGTTACTCTCACCCTCGTCAACTTTGATGATGTCGAGGACAAGATCGTTGATGAGCACGCAGACACCACCCTTTCTCGCGTTGTGATCAATGAGACCATGCTCAACGGAGACAACCCAGAAGACAGAAGAATCAAGCTCGTGATCGATGCTGTTAAACCTGCAGAAGGTGCATACTTGGGTATCGTTAAAGTCTTTGAGAATGAAGAAGATGAGAAGGAAGACAAGCCTCTTGATTGTGGTATCTTGAAGCAAGTCACCATCTCTCGTATCAACACCAAGGACATCTCTGTCCAACAATTGAAGGATATCCAACTCAAGCAAGCTAAGTTGTCCCAATCCCAAATGGATTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_300293.p1 GENE.R_Transcript_300293~~R_Transcript_300293.p1 ORF type:complete len:527 (+),score=127.69,TPR_12|PF13424.2|4e-08,TPR_12|PF13424.2|7.8e-09,TPR_12|PF13424.2|1.4e-07,TPR_12|PF13424.2|17,TPR_12|PF13424.2|78,TPR_2|PF07719.13|0.017,TPR_2|PF07719.13|38,TPR_2|PF07719.13|0.0045,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|1.8e+02,TPR_2|PF07719.13|1.4e+02,TPR_2|PF07719.13|1.2e+03,TPR_8|PF13181.2|0.2,TPR_8|PF13181.2|3.9,TPR_8|PF13181.2|0.0013,TPR_8|PF13181.2|26,TPR_8|PF13181.2|2.4,TPR_8|PF13181.2|1.3e+03,TPR_8|PF13181.2|65,TPR_11|PF13414.2|0.021,TPR_11|PF13414.2|0.00017,TPR_11|PF13414.2|4e-06,TPR_11|PF13414.2|0.2,TPR_11|PF13414.2|3e+02,TPR_11|PF13414.2|11,TPR_10|PF13374.2|66,TPR_10|PF13374.2|6.1,TPR_10|PF13374.2|3.2,TPR_10|PF13374.2|96,TPR_10|PF13374.2|55,TPR_10|PF13374.2|4e+03,TPR_10|PF13374.2|52,TPR_19|PF14559.2|0.0052,TPR_19|PF14559.2|1.8e+02,TPR_19|PF14559.2|1.4,TPR_19|PF14559.2|4.3,TPR_19|PF14559.2|28,TPR_1|PF00515.24|12,TPR_1|PF00515.24|6.3,TPR_1|PF00515.24|0.0096,TPR_1|PF00515.24|0.54,TPR_1|PF00515.24|2.6e+03,TPR_1|PF00515.24|1.5e+03,TPR_1|PF00515.24|8.4e+03,ANAPC3|PF12895.3|0.15,ANAPC3|PF12895.3|1.5,ANAPC3|PF12895.3|4.8,TPR_7|PF13176.2|1.2e+02,TPR_7|PF13176.2|27,TPR_7|PF13176.2|1.9,TPR_7|PF13176.2|8.3e+02,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|3.8e+03,TPR_14|PF13428.2|2.5e+03,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|1.8e+02,TPR_14|PF13428.2|3.3e+02,TPR_14|PF13428.2|18,TPR_14|PF13428.2|1.2e+03,TPR_14|PF13428.2|3.5e+02 R_Transcript_300293:176-1582(+)
MDDENQADENSAEWEMLITRAESLKHKGKFAESDSCFEKAYELMKNSFDKDHSFIALLFASWAPVLTFLKKYQKAEEILKKSLQILSKEDEVPMEQLVEIYSNLGEICIKTKKFDEAKNYLQLSIDKAEDKDSNPNVGVSKMNMAEVMFQEKKYNEVIQFCREAIDIFKQHLDPLHPVILQTQLKIVSVYIEQGDIDAADERFEEVCKSQSAEQDSPTYSLLMQQRANANYEFELYDKAKRLYLDCIDKVGNNSLSCHFKNEYSCLLRTIGEIEEAEKLLLEIRQESEKSPTSPLSISKYFQVLNPQQFTVTYTEKTDNKKPWPVWASYKLLLQVKRHPKDKTPRLRVGNIVTLTLVNFDDVEDKIVDEHADTTLSRVVINETMLNGDNPEDRRIKLVIDAVKPAEGAYLGIVKVFENEEDEKEDKPLDCGILKQVTISRINTKDISVQQLKDIQLKQAKLSQSQMDY*

Click here to download the sequence:
Link to NCBI Protein BLAST