Transcript Information: R_Transcript_30110.p2


Annotated TAIR IDAT1G77140.1
Annotated Gene Namevacuolar protein sorting 45
Annotated Gene Symbol(s)VPS45, ATVPS45
Annotation TypeOrtholog
Chromosome Positionchr1:28984163-28987681 | Forward length=569
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.481840806422
Replicate 217.121763432623
Replicate 321.900290425847
Condition 2: 8 Hour
Replicate 118.159991226252
Replicate 220.553147984077
Replicate 324.595591895111
Condition 3: 24 Hour
Replicate 124.369974631869
Replicate 221.047461472027
Replicate 323.003246753541


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30110.p2 GENE.R_Transcript_30110~~R_Transcript_30110.p2 ORF type:complete len:569 (+),score=109.14,Sec1|PF00995.19|8.8e-115 R_Transcript_30110:3638-5344(+)
ATGGTTTTAGTAACGGCAGTTCGAGACTACATCAATCGAATGCTCCAAGACATCTCCGGCATGAAAGTCCTCATTCTCGATTCTCAGACGGTTAGTGTTGTAAGTGTTGTCTATAGCCAGTCAGACTTACTGAAGAAGGAAGTGTTTTTAGTAGAATTGGTAGACTCGATTTCCATGTCAAAAGAATCCATGTCGCATCTGAAAGCTGTGTACTTCCTTAGACCCACATCAGAAAATATTCAGCGTTTGAGGCGTCAGCTTGCTAGTCCTAGATTTGGGGAGTATCACCTCTTTTTTTCCAATATATTGAAGGATGAACATATTCACAATTTAGCAGATTCAGATGAACATGAAGCTGTGCAACAAGTTCTGGAATTTTATGCAGATTTCATTGCTGTTGATCCTTGCCATTTCAGTCTCAATATTTCTTCAAATTACCTATATATGGTTCCAGCTTCAGTCGACTTTTCAAATTTGCAAAATTATTGTGATCGAATAGTTGATGGGGTTTCAGCAGTTTTCTTGGCACTAAAACGCCGGCCAATCATCCGATACCAGCGAACATCTGATATTGCTAAAAGGATAGCCCAGGAAACTGCGAAATTGATGTATCAGCAGGAGAGTGGTCTCTTTGATTTTAGAAGGACAGAAATTTCTCCATTGTTGCTTGTATTAGATAGGCGAGAAGACCCTGTTACTCCGTTGTTAAATCAGTGGACATATCAGGCAATGGTTCATGAGTTGATAGGAATCCAAGATAACAAAGTGGATTTGAGGACAGTTGGAAAGCTTCCAAAAGACCAGCAGGAGGTTGTGCTGTCTTCAGAGCAAGACGCTTTCTTCAAAGCCAACATGTACGAGAACTTTGGGGACATTGGAATGAATATCAAGAAAATGGTGGATGACTTCCAGCAAATTGCAAGAAGTAACCAGAACATCCAGACAATAGAGGACATGGCTAAATTTGTTGATAATTACCCTGAGTACAGAAAAATGCATGGTAATGTTTCAAAGCATGTGACACTAGTAACAGAGATGAGCAAGATAGTTGAGGAGAGGAAGCTTATGACAGTCTCTCAAACAGAACAAGAGCTTGCTTGCAATGGAGGACAAGGAGCAGCATTTGAGGCTGTAACAAATCTTCTAAACAATGAGCAAGTGTCAGATATAGATCGTCTACGGTTGGTAATGTTGTATGCTTTGCGCTATGAGAAGGAAAGTCCAGTTCAACTGATGCAACTTTTCAACAAGCTGGCTTCCAAGTCTCCAAAGTACAAGCCTGGGCTTGTGCAGTTTCTTCTGAAGCAAGCAGGTGTTGACAAGCGTACTGGGGACTTGTTTGGAAATAGGGATCTATTGAATATTGCACGTAATATGGCTCGTGGACTTAAGGGTGTGGAGAATGTGTATACACAACACCAGCCTCTGCTGTTTCAGACAATGGAGAGCATTTCCAAGGGGCGTTTGAGGGACGTTGACTACCCCTTCGTGGGAAATCACTTTCAGCAGGGCAGGCCACAGGATGTTGTCATTTTTGTTGTTGGTGGGACGACTTATGAGGAGTCACGTTCCGTTGCTCTGCTAAATGCCAGCAATTCTGGGATTCGATTTATTCTTGGAGGCACAACAATTCTCAACTCTAAGAGGTTCTTGAAAGACCTTGAAGAGGCTCATAGACTACTACGTTCCAGCAGCACTGTTGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30110.p2 GENE.R_Transcript_30110~~R_Transcript_30110.p2 ORF type:complete len:569 (+),score=109.14,Sec1|PF00995.19|8.8e-115 R_Transcript_30110:3638-5344(+)
MVLVTAVRDYINRMLQDISGMKVLILDSQTVSVVSVVYSQSDLLKKEVFLVELVDSISMSKESMSHLKAVYFLRPTSENIQRLRRQLASPRFGEYHLFFSNILKDEHIHNLADSDEHEAVQQVLEFYADFIAVDPCHFSLNISSNYLYMVPASVDFSNLQNYCDRIVDGVSAVFLALKRRPIIRYQRTSDIAKRIAQETAKLMYQQESGLFDFRRTEISPLLLVLDRREDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTVGKLPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKKMVDDFQQIARSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVEERKLMTVSQTEQELACNGGQGAAFEAVTNLLNNEQVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLASKSPKYKPGLVQFLLKQAGVDKRTGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQTMESISKGRLRDVDYPFVGNHFQQGRPQDVVIFVVGGTTYEESRSVALLNASNSGIRFILGGTTILNSKRFLKDLEEAHRLLRSSSTVV*

Click here to download the sequence:
Link to NCBI Protein BLAST