Transcript Information: R_Transcript_301178.p1


Annotated TAIR IDAT5G18100.1
Annotated Gene Namecopper/zinc superoxide dismutase 3
Annotated Gene Symbol(s)CSD3
Annotation TypeOrtholog
Chromosome Positionchr5:5987221-5988706 | Forward length=164
E-Value4E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6825255802426
Replicate 25.942349174424
Replicate 31.5127090865384
Condition 2: 8 Hour
Replicate 14.3889757924307
Replicate 26.7504548954522
Replicate 33.7673154117784
Condition 3: 24 Hour
Replicate 13.0321632187534
Replicate 21.2484108805987
Replicate 33.9232678212363


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_301178.p1 GENE.R_Transcript_301178~~R_Transcript_301178.p1 ORF type:complete len:106 (+),score=28.64,Sod_Cu|PF00080.16|6.6e-25 R_Transcript_301178:131-448(+)
ATGGCTTTCATATTCATGCCCTTGGGGATACCACTAATGGGTGCAACTCCACTGAAGGATCATGGAGCTCCTTCTGACACAGAACGCCATGCAGGTGATCTGGGTAACGTTGTTGCTGGTCCTGATGGGGTTGCTGAGATTTCCATTAAAGACTCCCAGATACCACTAAGTGGGCAGCATTCGATACTCGGAAGAGCTGTTGTGGTGCATGCTGATCCAGATGATCTTGGAAGAGGTGGACATGAACTCAGCAAGATGACTGGTAATGCCGGTGCCAGAGTAGGATGTGGCATCATAGGGTTACAGTCATCTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_301178.p1 GENE.R_Transcript_301178~~R_Transcript_301178.p1 ORF type:complete len:106 (+),score=28.64,Sod_Cu|PF00080.16|6.6e-25 R_Transcript_301178:131-448(+)
MAFIFMPLGIPLMGATPLKDHGAPSDTERHAGDLGNVVAGPDGVAEISIKDSQIPLSGQHSILGRAVVVHADPDDLGRGGHELSKMTGNAGARVGCGIIGLQSSV*

Click here to download the sequence:
Link to NCBI Protein BLAST