Transcript Information: R_Transcript_301179.p1


Annotated TAIR IDAT5G18100.1
Annotated Gene Namecopper/zinc superoxide dismutase 3
Annotated Gene Symbol(s)CSD3
Annotation TypeOrtholog
Chromosome Positionchr5:5987221-5988706 | Forward length=164
E-Value1.1E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.973309684343
Replicate 212.972236562936
Replicate 320.572293000366
Condition 2: 8 Hour
Replicate 110.761303702929
Replicate 217.518397875579
Replicate 316.301764952067
Condition 3: 24 Hour
Replicate 116.6700001526
Replicate 216.857522718913
Replicate 320.075346973969


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_301179.p1 GENE.R_Transcript_301179~~R_Transcript_301179.p1 ORF type:complete len:157 (+),score=35.08,Sod_Cu|PF00080.16|3.4e-47 R_Transcript_301179:90-560(+)
ATGGGAATAGTTAAGGCTGTGGCTGTCATCACCGGCAACTCCAACGTCAAAGGTTCACTCCAATTCGTCCAAGATCCCAACGGGTTGACACATGTGAAAGGAAGGATAACAGGGCTAACACCAGGGCTTCATGGCTTTCATATTCATGCCCTTGGGGATACCACTAATGGGTGCAACTCCACTGGGCCTCATTTTAATCCATTGAAGAAGGATCATGGAGCTCCTTCTGACACAGAACGCCATGCAGGTGATCTGGGTAACGTTGTTGCTGGTCCTGATGGGGTTGCTGAGATTTCCATTAAAGACTCCCAGATACCACTAAGTGGGCAGCATTCGATACTCGGAAGAGCTGTTGTGGTGCATGCTGATCCAGATGATCTTGGAAGAGGTGGACATGAACTCAGCAAGATGACTGGTAATGCCGGTGCCAGAGTAGGATGTGGCATCATAGGGTTACAGTCATCTGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_301179.p1 GENE.R_Transcript_301179~~R_Transcript_301179.p1 ORF type:complete len:157 (+),score=35.08,Sod_Cu|PF00080.16|3.4e-47 R_Transcript_301179:90-560(+)
MGIVKAVAVITGNSNVKGSLQFVQDPNGLTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDTERHAGDLGNVVAGPDGVAEISIKDSQIPLSGQHSILGRAVVVHADPDDLGRGGHELSKMTGNAGARVGCGIIGLQSSV*

Click here to download the sequence:
Link to NCBI Protein BLAST