Transcript Information: R_Transcript_30125.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.850371234194
Replicate 25.5115288592782
Replicate 38.5900265985572
Condition 2: 8 Hour
Replicate 15.2032463012896
Replicate 25.9007882636462
Replicate 37.0085385450939
Condition 3: 24 Hour
Replicate 19.9164972886333
Replicate 27.9337667398049
Replicate 310.700655624705


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30125.p1 GENE.R_Transcript_30125~~R_Transcript_30125.p1 ORF type:5prime_partial len:720 (+),score=100.00 R_Transcript_30125:3-2162(+)
CTTGCGGAGGATTCCAACTTATCTGTTGTTGGTGGAAGAGGTGGTCCTCTGGGGGGTGGTGGTGGTGGTGGTGGACGAATTCATTTTCATTGGTCTGATATAAATACTGGAGATGAATATGTTCCAATTGCCACAGTAAAGGGTAACATTGATAGTAGAGGAGGTGCAGGAGATAGTCCAGGTCATTATGGAGAAGAGGGCACAATCACCGGGAGAGAGTGTCCAAAGGGCTTGTATGGTACATTTTGCAGAGAATGTCCTGTTGGAACATTTAAGGATGTTATTGGATCTGATGAAGAGTTCTGTACTCCTTGCCCTCTAGAATTACTTCCTAACAGAGCAGAATATATCTATGTACGAGGTGGAGTGAGTAAACCATCATGTCCATACAAATGTATTTCTGATAAATACAGGATGCCCCACTGCTTTACACCTCTTGAAGAGCTATTATATACATTTGGAGGGCCTTGGACATTTTCCCTGTTCCTTCTGTTCTGTTTATTATCTTTAGGGCTATTGTTAAACATTCTCCGAAGGAAAATAGTTGGAGCAAGCTGTACATATAATAGTTCATATTCATTCGAACAACACCATTCTGATTATCGGTCTCCACATCTTCTCTCTCTATCAGAGGTAAAAGGACCCAGCAGAGCTGAAGAAACTCAAAGCCATGTCTATAGGATGTATTTTATGGGTCCGAATACCTTTAGCCAACCCTGGCACCTTCCTTATTCCCCTCCAGAAGAAATTGTGGAGATTGTGTATGAAGACGCCTTTAACAGATTTATTGACGAGATTAATTCTATTGCTGCCTATGATTGGTGGGAAGGGTCTGTGCATAGAATTCTTTTAGTTCTTGCTTATCCTTGTGCCTGGTCGTGGAAGCAATGGCGTCGCAGGATTAAAATCCAACGTCTTCAGGATTATGTCAAGTCTGAATATGATCATTCTTGTCTCCGCTCTTGCCGTTCACGTGCATTGTACAAAGGGATGAAGGTCGGAGGAACACTTGATTTAATGGTTGCATATATCGATTTCTTTCTAGGTGGTGATGAAAAGCGTATAGACATTGTATCAATTATACAAAAGAGATTCCCCTTGTGCATACTGTTTGGTGGGGATGGAAGTTATATGTCTCCTTATACTCTTCATAGTGACGCTCTGTTAACGAGTCTCATTGCTCAGCATGTCCCAACATCTGTGTGGAATCATTTGGTGGCTGGTTTGAATGCTCAGCTAAGAACTGTAAGGCATGGATTCGTCCGTTCAACACTTGCTCCTGTAGTTAGTTGGATCCGAAGTCACGCAAATCCCCAACTTGAGTTTCATGGGGTCAGGATTCATCTTGGTTGGTTTCATGCTACTGCTTCTGGCTATTGTCAACTTGGTATTTGGGTACTGGTTGATGATTACACGTTTTATAGTACACACCAACCTGATTCGACTAGTGTCACTGTTGACAAGTCTCCCAGGAGAAATGACAGAACGGGAGAAAAGCACTATAGGCAGCTACAACAGACACAAAGCTATGCAGCTCAGGCATTATCTCGTGGGAGGACTGGTGGACTACTAAATGGAGGTCTTATAGATGATGCTACATTGAAGTCGATTGAATTTAGAAGGGACTTCTTCTTTCCCTTTTCTCTGTTCCTGCGCAACACCAGGCCTGTTGGTTGCGAGGATACTCTGCAGCTGCTCATCTTGATCATGATGTTAGCCGATCTTTCACTCACTCTTCTTATGCTGGTTCAGTTTTATTGGATCTCTCTTGGGGCTTTTCTTGCTGTATTGCTTATTCTTCCTCTGTCCCTCTTATCCCCCTTTCCTGCGGGATTGAATGCCCTGTTCAGCAAAGGCCATCGAAAGGCTTCACTTGCTCGTATGTATGCATTATGGAATGCCACATCGTTATCGAACATCGCTGTGGCTTTCTTGTCAGGTGTAATATGTTATGTGATTATCTCCTTCAATGTGCCGCAACAGACGAATGCTAGAAATGCTAAAAGGGAGGATGATGCATGGTGGCTTCTCCCTACGATCCTTCTACTATTGAAGTGTATACAAGCTCGCTTTGTTGATTGGCACTTGGCAAACTTAGAAGTACCTGATTCTTCTTTGTTTACACCGGACCCTGATGCATTTTGGGCTCATGAGTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30125.p1 GENE.R_Transcript_30125~~R_Transcript_30125.p1 ORF type:5prime_partial len:720 (+),score=100.00 R_Transcript_30125:3-2162(+)
LAEDSNLSVVGGRGGPLGGGGGGGGRIHFHWSDINTGDEYVPIATVKGNIDSRGGAGDSPGHYGEEGTITGRECPKGLYGTFCRECPVGTFKDVIGSDEEFCTPCPLELLPNRAEYIYVRGGVSKPSCPYKCISDKYRMPHCFTPLEELLYTFGGPWTFSLFLLFCLLSLGLLLNILRRKIVGASCTYNSSYSFEQHHSDYRSPHLLSLSEVKGPSRAEETQSHVYRMYFMGPNTFSQPWHLPYSPPEEIVEIVYEDAFNRFIDEINSIAAYDWWEGSVHRILLVLAYPCAWSWKQWRRRIKIQRLQDYVKSEYDHSCLRSCRSRALYKGMKVGGTLDLMVAYIDFFLGGDEKRIDIVSIIQKRFPLCILFGGDGSYMSPYTLHSDALLTSLIAQHVPTSVWNHLVAGLNAQLRTVRHGFVRSTLAPVVSWIRSHANPQLEFHGVRIHLGWFHATASGYCQLGIWVLVDDYTFYSTHQPDSTSVTVDKSPRRNDRTGEKHYRQLQQTQSYAAQALSRGRTGGLLNGGLIDDATLKSIEFRRDFFFPFSLFLRNTRPVGCEDTLQLLILIMMLADLSLTLLMLVQFYWISLGAFLAVLLILPLSLLSPFPAGLNALFSKGHRKASLARMYALWNATSLSNIAVAFLSGVICYVIISFNVPQQTNARNAKREDDAWWLLPTILLLLKCIQARFVDWHLANLEVPDSSLFTPDPDAFWAHES*

Click here to download the sequence:
Link to NCBI Protein BLAST