Transcript Information: R_Transcript_30128.p1


Annotated TAIR IDAT1G27752.1
Annotated Gene NameUbiquitin system component Cue protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9662250-9667318 | Forward length=873
E-Value2.8E-300
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.310136457834
Replicate 29.5099522372823
Replicate 311.36458299344
Condition 2: 8 Hour
Replicate 110.032967918583
Replicate 213.792924900931
Replicate 314.372537755899
Condition 3: 24 Hour
Replicate 110.75432165816
Replicate 29.3789805248967
Replicate 311.246838288727


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30128.p1 GENE.R_Transcript_30128~~R_Transcript_30128.p1 ORF type:complete len:903 (+),score=189.02,CUE|PF02845.12|1.1e-09 R_Transcript_30128:150-2711(+)
ATGTCGAACCGATCAGCAAGCTACCGCCAAGAAACCAACAGCAGAGGTTTTAGGGGCAAGACCCAGAAAAAATTCGTCCCGAAAAACCCACCTATTTCATCACTTCCAAACACCACAACAACCGCCAATCCTACTCTCTCAGCTTCACTCCGTCAATCCATTTCAGGCCTACCGTCAAATAGCGGAAGCGGGTCCGGGTCGGGTCGACAAAGTAGGGTCCGATTGGGAGATAATGGGGAATGGGTTTCAAGTAAAACTCAAAGTGGTGGTGGCGGCGGCAATTTTGTTAATTACTTGCCTCAAGATGAAGCTGTGGCTGTTGGTTTGAGCGCAGAAGAAGGTGGGTTGGATGCAGTTGAGTCTCAGAGAGTGGTTGATCTTCTTAACAGAGAGTTGGCTATGTTGCTCAAGCTTAAGCCCCGAGATTTCTGGCGACAAGTGGCTGCAGATGCTTCCTTGCATGAATTTCTTGATAGCTTCTTGAAATTTAGGAGTAGATGGTATGATTTCCCTTATCATGGAACCAAGGGAGTAGTTGCTGGTGTTATTGTTGGTGACCTAGAGCTGAGCCGCCGTGTTTTCATGGTATTGTATCGGATATCGTCTAATAGAGATCCAGGTGTTCCTGCTTCTGACAGTCTCAGTCAAAAGGATCATGAAGCCCTTCTGCAGGAAAAGAAATTGCTTGACTTGCCCAAGTTGTTGGATATATGCGCAGTATATGGTCATGAAAATGAGGATTTGACAAGAGTACTGATTTTGAATGCTATACATGCTCAGCCATGGATCCACAGAAGACTAACTTCCATGATATCTCATTTCTTGGGCATAGTTCAGACTATGTATCAACGTTGCAGTTCATCTTTAGAGGCATTGATTTCTGCTGGTGGCTTTGGAGACCATGGATCCGGTCGTCGGCATTTAGAATACTTAGAGGTAATGGATTTCTTAAATGATGCTGTTGTGTCCATGGACACATTTGTGAGTGCGTACAGACCTGCAGCTATTTTCTTCTCTTGCCCTGTTGATGCTAGTCATGGAAATGAGGAGATGATCAATGTTCTTGCAATGCTACATGATCTATTAATACCATCTTTACAACAGGGGCTCCATATCATTTTAGCAGCTGGGGACAAAACCTCCTCCATGCTTTCTGATGTTTCTGTGAGTTTGAGAATTTTATCTGCACGAATAGTGGACTTGGGTTGGAAATTATTGGAAAACTGTTACTTAAGTGATGAGTTATTCAAAGATCACCTTCCCTTCCTTCCTGAAATGAAAATGTTTCCTGCTAGTGTCGAGGATCCTGTAATAAGGGCTGACATATTGGTTCAGATATTTAAGGAAATTGCTGCAGTTCCTCAGCATGCTCAGGTCAAACATTACCGGGGTACCTATCTTCAAAATATTGACAAGAAGTACCAAATTATGCTGCAAATTCAGAGCCTGCAACATAGAGGATGGATTCAAATAGATGATGAGCAACACCAATACTTGGCTGGTATGATGACACATCCTGTGACCACTATTTCTAACAAGTCAGTAACCGTTGTGAACTCTGTCAGAAGTGATGGATTGCAAAAGGAGGAAGAGGCAGCAATTACACAATCAAAGATCAATCAAGTGAAAGATCTTTTCCCTGATTATGGAAATGGTTTTATATCAGCGTGTCTGGAAGTATACGACCATAATCCAGAGGAGGTGATCCAAAGGATTTTGGAAGGAACTTTGCATGAAGATCTGCAGGTCCTGGACACGTCAATGGAAACTGCCCCGCCCAAGTCGACTCCATCACTGACCGAGAAGGATAAGGGAAAAGGGAAACTTGTGGAATCCACAGCACCCTCCACTACAAATGCAATTCTGTTGCCTCAAAAACCAAGGCCTGAAATCATTACTACATCCTCATCACAGTCTTCTTTGCCATCGTCAGGTGGAAGATTTGTCAGAAAATCTAATGATGCCCAAGCTGATGATGTCACTCTTTATTCTAGAGATGATAAGCCCATGGAGAAGACAGCTTTGTTGCTATCACAATACGAATATGAAGATGAATATGATGACTCTTTTGATGACCTGGGAATGACGATTGTGGAATCAGGGGTGGAGGAGACGGAGATTTTAGGTGAGAGAATCCGCTCAAGTATGAGCATATCTTCACAATCTGAAGGCCAAAGTACTGCTCCTAGTGCTAGTAGCTCTAAATGGAACTCAAGAAAGAAGCCTCAATATTATGTCAAGGATGGGAAGAATTACAGTTACAAAGTTGAAGGTGCTATTGCAGTTGCTGATCAGAAGCAGGCATCTTTAGTCAATCAAGCTCAGAAAGAACTTATACATGGACTTGGGCGTGGTGGGAACAGTCCTCTGGGTGCGATCAAGCAACTAGAAGATCAAAATGAAGCCGAAGGAGATGAGGTTGAGCCATCGGAGGTAAATAGTGGCGGTAATGGTGGGAGGGGAAGGGGGAGGGGCCGAGGAAGGAGAGGCAGTGGAGGAAGAAATCATTACAGGAAGGATCGAGCCATGAAGAAACACATGGCTGGCGTGGGTGGATTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30128.p1 GENE.R_Transcript_30128~~R_Transcript_30128.p1 ORF type:complete len:903 (+),score=189.02,CUE|PF02845.12|1.1e-09 R_Transcript_30128:150-2711(+)
MSNRSASYRQETNSRGFRGKTQKKFVPKNPPISSLPNTTTTANPTLSASLRQSISGLPSNSGSGSGSGRQSRVRLGDNGEWVSSKTQSGGGGGNFVNYLPQDEAVAVGLSAEEGGLDAVESQRVVDLLNRELAMLLKLKPRDFWRQVAADASLHEFLDSFLKFRSRWYDFPYHGTKGVVAGVIVGDLELSRRVFMVLYRISSNRDPGVPASDSLSQKDHEALLQEKKLLDLPKLLDICAVYGHENEDLTRVLILNAIHAQPWIHRRLTSMISHFLGIVQTMYQRCSSSLEALISAGGFGDHGSGRRHLEYLEVMDFLNDAVVSMDTFVSAYRPAAIFFSCPVDASHGNEEMINVLAMLHDLLIPSLQQGLHIILAAGDKTSSMLSDVSVSLRILSARIVDLGWKLLENCYLSDELFKDHLPFLPEMKMFPASVEDPVIRADILVQIFKEIAAVPQHAQVKHYRGTYLQNIDKKYQIMLQIQSLQHRGWIQIDDEQHQYLAGMMTHPVTTISNKSVTVVNSVRSDGLQKEEEAAITQSKINQVKDLFPDYGNGFISACLEVYDHNPEEVIQRILEGTLHEDLQVLDTSMETAPPKSTPSLTEKDKGKGKLVESTAPSTTNAILLPQKPRPEIITTSSSQSSLPSSGGRFVRKSNDAQADDVTLYSRDDKPMEKTALLLSQYEYEDEYDDSFDDLGMTIVESGVEETEILGERIRSSMSISSQSEGQSTAPSASSSKWNSRKKPQYYVKDGKNYSYKVEGAIAVADQKQASLVNQAQKELIHGLGRGGNSPLGAIKQLEDQNEAEGDEVEPSEVNSGGNGGRGRGRGRGRRGSGGRNHYRKDRAMKKHMAGVGGF*

Click here to download the sequence:
Link to NCBI Protein BLAST