Transcript Information: R_Transcript_301578.p1


Annotated TAIR IDAT5G61000.1
Annotated Gene NameReplication factor-A protein 1-related
Annotated Gene Symbol(s)RPA70D, ATRPA70D
Annotation TypeHomolog
Chromosome Positionchr5:24549682-24552641 | Reverse length=629
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.20188750400287
Replicate 30
Condition 2: 8 Hour
Replicate 10.54936235458563
Replicate 20.28667797232289
Replicate 30.69813887001488
Condition 3: 24 Hour
Replicate 10.14716543094682
Replicate 20
Replicate 30.14030579927498


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_301578.p1 GENE.R_Transcript_301578~~R_Transcript_301578.p1 ORF type:5prime_partial len:312 (+),score=44.76,REPA_OB_2|PF16900.1|10,REPA_OB_2|PF16900.1|1.8e-09 R_Transcript_301578:2-937(+)
AAACCACATGGCAGCCAGCATCAGAGGAGACCTTATGGTCCAAGAGATTATATCAAGTTGTTCAAGGCGTCAGTACACGATCTTTACAAGGACATCCAAATACACATCATGAAACCAGAGTATATTCCACTAAACAAGCTTGCATCACAGACCGGCCCTCACAAAATCCGTGTACGTGTCATTGAAAAATGTAGACCAAGAACTTCAGCAAAAAACAACAAATTCCAGAACATTATACTCACTGATGAACTGGGTAACAAAATGCGTGCAACATTGTTTAATGATGATATCGCTGCATATGAAGATATCATCACAATCAATGGTGTTTATGAAATTGCAAACCCAATTGTCAAGCCGTTGCCAGAACAATTCCAGACCTATCCGGATGAGCATCAGATGACCATAAACACATCAACAACTATTCAGACAATAGAGCAGCCAGGTCTTAATGACGTTCCAGACTATCACAGCATTGCGTCTGTCCCAAAGACTAGCAGTTCGGAGGAACGCATTGATATACTTGGAATTGTCCTCTATGTAGAACCTGCAAGAGAAGTGACTGGTATCCATGGACGGAAAGTTGATGTTAGGGAAATTGTTATCACAGACAGTAGCTCACCAAGAACTCTTACTATTTCACTATGGAATGACTTGGCCCACCGGGGATCAACTATACTTGAACAGTGGGCTGAGAAACAACTCATCATTGGGTTTCTCTCACTCAGGGCAACTGGATACAAAGGATTTTCTTTAGCATCAACCATGTCATCTCAATTTATCAGCAAACCCACTGGAGAGAGAGTTACTTTTTTACAGAAATGGCAAGATGCAAACAAACAAGAAATCAATGAGAGACTCGAACGAGTAAAAGCAGCTAGAACATCTCAGACGTTTGAGAACATCACACTGCCTGCAACCATTGTGGAAAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_301578.p1 GENE.R_Transcript_301578~~R_Transcript_301578.p1 ORF type:5prime_partial len:312 (+),score=44.76,REPA_OB_2|PF16900.1|10,REPA_OB_2|PF16900.1|1.8e-09 R_Transcript_301578:2-937(+)
KPHGSQHQRRPYGPRDYIKLFKASVHDLYKDIQIHIMKPEYIPLNKLASQTGPHKIRVRVIEKCRPRTSAKNNKFQNIILTDELGNKMRATLFNDDIAAYEDIITINGVYEIANPIVKPLPEQFQTYPDEHQMTINTSTTIQTIEQPGLNDVPDYHSIASVPKTSSSEERIDILGIVLYVEPAREVTGIHGRKVDVREIVITDSSSPRTLTISLWNDLAHRGSTILEQWAEKQLIIGFLSLRATGYKGFSLASTMSSQFISKPTGERVTFLQKWQDANKQEINERLERVKAARTSQTFENITLPATIVENK*

Click here to download the sequence:
Link to NCBI Protein BLAST