Transcript Information: R_Transcript_301979.p1


Annotated TAIR IDAT3G19840.1
Annotated Gene Namepre-mRNA-processing protein 40C
Annotated Gene Symbol(s)ATPRP40C, PRP40C
Annotation TypeHomolog
Chromosome Positionchr3:6891228-6897227 | Forward length=835
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.39992953173901
Replicate 30.43631881135528
Condition 2: 8 Hour
Replicate 10
Replicate 20.63888233831959
Replicate 31.2101073746925
Condition 3: 24 Hour
Replicate 10.87458313248397
Replicate 20
Replicate 30.41690866070281


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_301979.p1 GENE.R_Transcript_301979~~R_Transcript_301979.p1 ORF type:5prime_partial len:105 (+),score=5.69 R_Transcript_301979:1-315(+)
CACACATTTAGGAAGAAATGGGGTCATGATCCTCGATTTGAGGCCTTGGACCGCAAGGATCGAGAGGCTCTGCTGAATGAGAGGTATCTTGACGGTTATGTTGTAGCATCAGTTGCTCTTCTATTTTTGCAAAGTGATTTCTTTTTGTTGTTAAGCTATGGATGCGTTTGTGATCATAAATCATGTTACGTTTTTAAGCTCTTTTTAACTTGTAAGAGTATTAGGCTTTTTTTTTTTTTTGGAATAGGAAAATGTATTACAATGTCCATTTTCAATGGGGCCAAATATTTTACTATATTTTTGGTCTTGGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_301979.p1 GENE.R_Transcript_301979~~R_Transcript_301979.p1 ORF type:5prime_partial len:105 (+),score=5.69 R_Transcript_301979:1-315(+)
HTFRKKWGHDPRFEALDRKDREALLNERYLDGYVVASVALLFLQSDFFLLLSYGCVCDHKSCYVFKLFLTCKSIRLFFFFGIGKCITMSIFNGAKYFTIFLVLE*

Click here to download the sequence:
Link to NCBI Protein BLAST