Transcript Information: R_Transcript_302430.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value6E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0737035855717
Replicate 20.74104589704581
Replicate 30.53898206108594
Condition 2: 8 Hour
Replicate 12.3045519950348
Replicate 20.78920759439479
Replicate 32.3490319626383
Condition 3: 24 Hour
Replicate 11.8906429481639
Replicate 20.25947363400679
Replicate 31.0300096323246


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_302430.p1 GENE.R_Transcript_302430~~R_Transcript_302430.p1 ORF type:internal len:85 (+),score=2.22,rve|PF00665.22|9.8e-06 R_Transcript_302430:2-253(+)
AGAGTGCTTAGGAAAAATAATGTTATTTCTAGTACTCGTTTTATTAGTGATGGTGTTTCTTGTAAACTTGGGAAATCCCATAAGCTGCCCTTTTCTTTAGCTCACCATCAATGTAAAAAACCTCTTCAATTAATACATTCAGATGTTTGGCAGTCTCCCATTGTGTCGCATCTTGGTTATAAATATTATGTGGTATTTGTGGATGATTTCTCGAGATTTACATGGATTTATCCAATGAAATATAAGTCCGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_302430.p1 GENE.R_Transcript_302430~~R_Transcript_302430.p1 ORF type:internal len:85 (+),score=2.22,rve|PF00665.22|9.8e-06 R_Transcript_302430:2-253(+)
RVLRKNNVISSTRFISDGVSCKLGKSHKLPFSLAHHQCKKPLQLIHSDVWQSPIVSHLGYKYYVVFVDDFSRFTWIYPMKYKSD

Click here to download the sequence:
Link to NCBI Protein BLAST