Transcript Information: R_Transcript_302486.p1


Annotated TAIR IDAT1G79740.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30004367-30006715 | Reverse length=651
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40306222928401
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.38621238087137
Replicate 20.846468713231
Replicate 30.91616962121827
Condition 3: 24 Hour
Replicate 10.50695473373479
Replicate 20.069574949181632
Replicate 30.41427832214948


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_302486.p1 GENE.R_Transcript_302486~~R_Transcript_302486.p1 ORF type:5prime_partial len:317 (-),score=41.45,DUF659|PF04937.11|1.3e+03,DUF659|PF04937.11|1.2e-33 R_Transcript_302486:190-1140(-)
TTCAGCTACAATGTCTCTCCTTCCAGCACCCAAGAAACAAACCATACCCAAAAGTTAGATCTTGAGCGAAACCCACTATGGAGGCATGTAACCATTATTTCAGCACCTAAGGGAGGAGGAGGAAATAGAGTGTGGATGTGTTCTTACTGTAATAGAACCTTCACAAGTTCATATTCCAAAGTGAAGGCTCATCTCCAAAAAACTCCCAAGCAAGGAATTACTTGCTGCCCCTCTATACAAGATGATGTTAGGAAGATGCTAGTAAAGGAGCAAAACCAAGCAGATCAGAAGAAAGCCATATCAAAATCAAATGCTGTGATGAAAGCTGAGTACCTAACACTGCCTCTAGGTTCTGACTTGCTCCAACATAAAAAAAGAAAAGGTAACTGTTCTTCAACCATTGAGCGGACTTTTAATATCCAAGAACGTGATGAAATTGATAAAGAAATTGCTCGTGCATTTTATACTGGTGGAATTTCATTCAATTTTGTCAAAAATCCTTACTTCCGAAAATCCTTAGTAAGGTTAGGCAATAGTAATCTTGCTGGATATTGTCCCCCTACTATAAATAGGATGAGGACAACTTTGCTTTCACAAGAGAAATCACATGTGCTGAGACTTTTACAACCATTCAAAAACACTTGGAATAGAAGAGGGGTTTCTCTATGTTCTGATGGGTGGGGGGATTTGCAAAAAAGGCCTTTGATAAACATAATGGCTGCTTTAGGTGGACAATGCATGTTTGTTAAGGCTATAGATACAACCGGAAACATCAAGGACATAAATTATGTTGCTGAATTGTTTGTGTCAGTTGTTGAAGAGATAGGACCAGATAATGTGGTGCAAATTTGTACTGATAATGTTGGGAATTTTAAAGGGGCAGGATTAGCGGTAGAGAAAAAATATCCCATATTTTTTGGACCCCCTGTGTTGTTCATTGTTCGAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_302486.p1 GENE.R_Transcript_302486~~R_Transcript_302486.p1 ORF type:5prime_partial len:317 (-),score=41.45,DUF659|PF04937.11|1.3e+03,DUF659|PF04937.11|1.2e-33 R_Transcript_302486:190-1140(-)
FSYNVSPSSTQETNHTQKLDLERNPLWRHVTIISAPKGGGGNRVWMCSYCNRTFTSSYSKVKAHLQKTPKQGITCCPSIQDDVRKMLVKEQNQADQKKAISKSNAVMKAEYLTLPLGSDLLQHKKRKGNCSSTIERTFNIQERDEIDKEIARAFYTGGISFNFVKNPYFRKSLVRLGNSNLAGYCPPTINRMRTTLLSQEKSHVLRLLQPFKNTWNRRGVSLCSDGWGDLQKRPLINIMAALGGQCMFVKAIDTTGNIKDINYVAELFVSVVEEIGPDNVVQICTDNVGNFKGAGLAVEKKYPIFFGPPVLFIVRT*

Click here to download the sequence:
Link to NCBI Protein BLAST