Transcript Information: R_Transcript_302842.p1


Annotated TAIR IDAT3G19770.1
Annotated Gene NameVacuolar sorting protein 9 (VPS9) domain
Annotated Gene Symbol(s)ATVPS9A, VPS9A, VPS9
Annotation TypeHomolog
Chromosome Positionchr3:6866916-6869114 | Forward length=520
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17219774485584
Replicate 20.5942349174424
Replicate 30.43220259615382
Condition 2: 8 Hour
Replicate 10.46199745183481
Replicate 20.63285514644865
Replicate 30.34248321925258
Condition 3: 24 Hour
Replicate 11.0829154352691
Replicate 20.41613696019957
Replicate 30.41297556013014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_302842.p1 GENE.R_Transcript_302842~~R_Transcript_302842.p1 ORF type:5prime_partial len:106 (+),score=15.15 R_Transcript_302842:2-319(+)
CTACACAATGCTGCTGTTGCTGCTAATGAAGACCCTCCTGGAGCTGATGAATTTCTTCCAGTTCTTATTTATGTGACAATAAAGGTCAGTCCTACATCTAACATCATTTTGCTGTCTCCTCTCTCCCACATTTTAGAAAAGTTTGAGATACGTTTGCATTGCCCTTTAAATGGATGTAACCTTGCTACAATGGAGAGGCAAATTGTTTCATGGACTCATAGCTTTCATTTAAGTCTCTTTGTGCTCCTACTTAAATTTTTACTGAACAACAACAATAACCACTTAGCCTTAGTCTTAAACAAAGTTGGGATCGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_302842.p1 GENE.R_Transcript_302842~~R_Transcript_302842.p1 ORF type:5prime_partial len:106 (+),score=15.15 R_Transcript_302842:2-319(+)
LHNAAVAANEDPPGADEFLPVLIYVTIKVSPTSNIILLSPLSHILEKFEIRLHCPLNGCNLATMERQIVSWTHSFHLSLFVLLLKFLLNNNNNHLALVLNKVGIG*

Click here to download the sequence:
Link to NCBI Protein BLAST