Transcript Information: R_Transcript_303143.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeHomolog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1678100896341
Replicate 21.6956632165181
Replicate 30.9249751523387
Condition 2: 8 Hour
Replicate 11.2795463867919
Replicate 20.47802360230563
Replicate 30.73296289916052
Condition 3: 24 Hour
Replicate 11.0906321723375
Replicate 21.4668580734826
Replicate 32.8594388545828


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_303143.p1 GENE.R_Transcript_303143~~R_Transcript_303143.p1 ORF type:5prime_partial len:421 (+),score=8.67,LRR_8|PF13855.2|4.2e-07,LRR_8|PF13855.2|7.9e-08,LRR_8|PF13855.2|0.0058,LRR_8|PF13855.2|3.8,LRR_8|PF13855.2|5,LRR_1|PF00560.29|5,LRR_1|PF00560.29|13,LRR_1|PF00560.29|4.4,LRR_1|PF00560.29|0.16,LRR_1|PF00560.29|55,LRR_1|PF00560.29|43,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|3.6e+02,LRR_4|PF12799.3|3.5,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|2,LRR_4|PF12799.3|80,LRR_4|PF12799.3|7.9e+02,LRR_4|PF12799.3|0.52,LRRNT_2|PF08263.8|1.3e-05 R_Transcript_303143:3-1265(+)
AACATGGAATCTATTGACCATTCAAAAATCCTTTTACTCTTCATGTTCCTTTTCTTCTCCATGATTAGCCACAGTATCTGCTACGAGCTTTGCAGTCCTTACGACAAGAACGTGCTGCTGGGAGTGAAGAACAAGTTAGACAACCCTAGATCACTCGGGTCTTGGCAAAACAACACTGATTGTTGCAGCGAATGGTGGCGGTACAACTTGCCACCACGCTACAACTTCGCCATGGAACTTGCCTGCGACAACAATGGCAACATCGTCAGCCTCATGATCATGTGGGCTGACGATATAGTCCTAGGTGACCTTCTACCGGCATTGGCGGACCTACGTTATCTTCAGTCAATCACAATTGCACATATATTCAACACCTCGACCGAAATCCCTCCCGAATATTGTACCAAACTCACCAATCTTGAGATCTTAACCATCTCGGACAGCAACCTAACTGGCTCAATCCCGGAATGCTTAGGCCAGCTCGCTAGTTTAAGGGACATTGATCTCTCTGTTAATAGACTCACAGGCGAAATACCACAATCTATAGCCCAAAAACCCAACCTCCGAACTCTTAAGCTCAGCAACAACCAATTATCCGGAATGATACCTGAATTCCGAACCTCAAACAACGCCCTGTACTCAATCAATCTCGCAGGCAACAATCTCTCTGGTCCGATCCCACCATCTATCCAACACCTTTCGAACCTCAGCAAGCTCCTACTATCTAGCAACCAGCTCACCGGTCCAATCCCACCGGGTATTGGATACACCAGGACCTTCAGACTGCTCATACTCTCCAACAACAAGCTCAACGGTTCAATCCCAGAGAGTTTCGGCTCATTACCAGACGGAATAGGAATCATGTTAGACGGAAATCAGCTAAGAGGGCCGATCCCCATGTCCATGAGCCAGCTTGATTTATGGTACTTTGATGTTTCGAAAAATAACCTCACTTGTGATGCCTCGTTTTTGTTTCGTAGGGACAGATACTTCACCGAAATGATCAATCTTAGCAGCAATAAGTTGAAGTTCAATTTCTCAAATGTGGAATGCCCTCAGTATTTGGTACAGCTCAATATAAGCCACAATAAGATCTATGGTTCCATCCCACAAGAGTTTGCACGGATGCCGGTTATGGATGTGAGTTATAATCGACTTTGTGGCCCCATCCCGAGTGGGGGAAAATTGCAGCAGCAAAGTCCTAGCAACTTTGCTCACAATCACTGTCTTTGCGGTCCTCCATTAGAAGAACCTTGCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_303143.p1 GENE.R_Transcript_303143~~R_Transcript_303143.p1 ORF type:5prime_partial len:421 (+),score=8.67,LRR_8|PF13855.2|4.2e-07,LRR_8|PF13855.2|7.9e-08,LRR_8|PF13855.2|0.0058,LRR_8|PF13855.2|3.8,LRR_8|PF13855.2|5,LRR_1|PF00560.29|5,LRR_1|PF00560.29|13,LRR_1|PF00560.29|4.4,LRR_1|PF00560.29|0.16,LRR_1|PF00560.29|55,LRR_1|PF00560.29|43,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|3.6e+02,LRR_4|PF12799.3|3.5,LRR_4|PF12799.3|0.00018,LRR_4|PF12799.3|2,LRR_4|PF12799.3|80,LRR_4|PF12799.3|7.9e+02,LRR_4|PF12799.3|0.52,LRRNT_2|PF08263.8|1.3e-05 R_Transcript_303143:3-1265(+)
NMESIDHSKILLLFMFLFFSMISHSICYELCSPYDKNVLLGVKNKLDNPRSLGSWQNNTDCCSEWWRYNLPPRYNFAMELACDNNGNIVSLMIMWADDIVLGDLLPALADLRYLQSITIAHIFNTSTEIPPEYCTKLTNLEILTISDSNLTGSIPECLGQLASLRDIDLSVNRLTGEIPQSIAQKPNLRTLKLSNNQLSGMIPEFRTSNNALYSINLAGNNLSGPIPPSIQHLSNLSKLLLSSNQLTGPIPPGIGYTRTFRLLILSNNKLNGSIPESFGSLPDGIGIMLDGNQLRGPIPMSMSQLDLWYFDVSKNNLTCDASFLFRRDRYFTEMINLSSNKLKFNFSNVECPQYLVQLNISHNKIYGSIPQEFARMPVMDVSYNRLCGPIPSGGKLQQQSPSNFAHNHCLCGPPLEEPCN*

Click here to download the sequence:
Link to NCBI Protein BLAST