Transcript Information: R_Transcript_303329.p1


Annotated TAIR IDAT2G38910.1
Annotated Gene Namecalcium-dependent protein kinase 20
Annotated Gene Symbol(s)CPK20
Annotation TypeOrtholog
Chromosome Positionchr2:16245214-16247483 | Reverse length=583
E-Value9e-317
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27920399165918
Replicate 20.16058355958928
Replicate 30.30659113417412
Condition 2: 8 Hour
Replicate 10.37454477930777
Replicate 20.81234561182127
Replicate 30.20824027480367
Condition 3: 24 Hour
Replicate 10.7023420949202
Replicate 20.42170667094794
Replicate 30.50220354922135


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_303329.p1 GENE.R_Transcript_303329~~R_Transcript_303329.p1 ORF type:5prime_partial len:523 (+),score=93.59,Pkinase|PF00069.21|2.6e-73,EF-hand_1|PF00036.28|1.2e-07,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|1.6e-06,EF-hand_1|PF00036.28|1.8e-08,EF-hand_7|PF13499.2|9.9e-13,EF-hand_7|PF13499.2|4.7e-13,Pkinase_Tyr|PF07714.13|7.5e-27,Pkinase_Tyr|PF07714.13|4.8e+03,EF-hand_6|PF13405.2|1e-06,EF-hand_6|PF13405.2|0.077,EF-hand_6|PF13405.2|3.5e-07,EF-hand_6|PF13405.2|0.0016,EF-hand_5|PF13202.2|1.6e-05,EF-hand_5|PF13202.2|0.009,EF-hand_5|PF13202.2|0.00014,EF-hand_5|PF13202.2|0.0019,EF-hand_8|PF13833.2|0.0066,EF-hand_8|PF13833.2|5.9e-09,EF-hand_8|PF13833.2|0.17,EF-hand_8|PF13833.2|1.5e-11,EF-hand_4|PF12763.3|2.3e+02,EF-hand_4|PF12763.3|0.0038,EF-hand_4|PF12763.3|0.018,EF-hand_9|PF14658.2|0.00021,EF-hand_9|PF14658.2|1.1 R_Transcript_303329:2-1570(+)
TCCGACGCCACCTCTAATTCCCGTCATTCCGATACCGCCTCCTCCGTCCAAAAATCCCCCCCTGAACAAATGACCATCCCGCCCTCCCCCAAAAGCAGCAACCCTAACCCTAACCCCAAACCCAAGCACGTGCGGCGCGTATCGAGCGCGGGTCTCCAGGTGGACTCAGTCCTGGGCAGGAAAACGGGCAACATCAAGGACGTGTACAGCCTGGGCAGGAAGCTCGGGCAGGGTCAGTTCGGGACCACCTTCTTGTGCGTCGAGAAGTCCACCGGCAAAGAGTTCGCGTGCAAGTCAATCGCCAAGAGGAAGCTGACGTCACCCGAGGATGTTGAGGACGTCAGACGGGAGATCCAGATCATGCACCACTTGGCGGGTCACCCGAATGTTATTCAGATTGTTGGTGCTTACGAGGATGCTGTGGCTGTCCACGTGGTCATGGAGTTGTGTGCCGGCGGTGAGCTGTTCGATCGGATTATCCAACGTGGACATTATACGGAACGGAAAGCTGCTGAGCTGGCTAGGGTTATTGTTGGGGTTGTTGAGGCTTGTCATTCGTTGGGTGTCTTGCATAGGGATTTGAAGCCGGAGAATTTCTTGTTTGTTGGGCACGATGAGGAGTCTCTTCTTAAGACTATTGATTTTGGACTCTCTGTCTTCTTTAAACCAGGTGAAACATTCACAGATGTAGTGGGAAGTCCTTATTACGTGGCTCCTGAAGTTTTAAGGAAATTTTATGGTCAAGAATGTGATGTTTGGAGTGCAGGTGTGATCATCTATATATTACTAAGTGGTGTGCCCCCATTTTGGGATGAATCTGAACAAGGAATATTTGAGCAAGTTTTGAAAGGTGATCTTGATTTTATATCTGAACCATGGCCTAGTATATCTGATAGTGCAAAGGACCTTGTCAAAAGAATGCTTGTAAGGGACCCTAAGAAGCGGCTTACAGCGCATCAAGTACTCTGTCATCCCTGGGTGCAGGTTGATGGAGTGGCACCAGACAAGCCGCTTGATTCTGCAGTTCTTACTCGTTTGAAACAATTTTCTGCCATGAACAAGCTTAAAAAGATAGCCATAAGGGTAATTGCAGAGAGCCTTTCTGAAGAAGAAATTGCAGGCCTGAAACAGATGTTCAAAATGATTGATACTGATAATAGTGGACAAATCACCCTTGAGGAGCTTAAAAAGGGATTGGAAAAAGTTGGTGCCAATCTTAAGGATTCTGAAATAGTTGGGTTGATGCAAGCAGCAGATATCGACAATAGTGGTACAATAGATTACAGTGAGTTTGTTGCTGCAATGCTTCATCTAAATAAAATACAGAAGGAGGATCATCTTTATGCAGCGTTCTCATATTTTGACAAAGATGGTAGTGGGTACATCACCCCTGACGAGCTCCAACATGCTTGTGAGCAGTTTGGTTTGGGAGATGTGCAGTTGGATGAGATTATTCGCGAAGTTGATCAAGATAATGATGGACGGATTGACTACAGCGAATTTGTGGCCATGATGCAAGATAATGCTTTTGGCATGAAGGGTATATCAAATAACCTGAGGTTGGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_303329.p1 GENE.R_Transcript_303329~~R_Transcript_303329.p1 ORF type:5prime_partial len:523 (+),score=93.59,Pkinase|PF00069.21|2.6e-73,EF-hand_1|PF00036.28|1.2e-07,EF-hand_1|PF00036.28|2.7e-05,EF-hand_1|PF00036.28|1.6e-06,EF-hand_1|PF00036.28|1.8e-08,EF-hand_7|PF13499.2|9.9e-13,EF-hand_7|PF13499.2|4.7e-13,Pkinase_Tyr|PF07714.13|7.5e-27,Pkinase_Tyr|PF07714.13|4.8e+03,EF-hand_6|PF13405.2|1e-06,EF-hand_6|PF13405.2|0.077,EF-hand_6|PF13405.2|3.5e-07,EF-hand_6|PF13405.2|0.0016,EF-hand_5|PF13202.2|1.6e-05,EF-hand_5|PF13202.2|0.009,EF-hand_5|PF13202.2|0.00014,EF-hand_5|PF13202.2|0.0019,EF-hand_8|PF13833.2|0.0066,EF-hand_8|PF13833.2|5.9e-09,EF-hand_8|PF13833.2|0.17,EF-hand_8|PF13833.2|1.5e-11,EF-hand_4|PF12763.3|2.3e+02,EF-hand_4|PF12763.3|0.0038,EF-hand_4|PF12763.3|0.018,EF-hand_9|PF14658.2|0.00021,EF-hand_9|PF14658.2|1.1 R_Transcript_303329:2-1570(+)
SDATSNSRHSDTASSVQKSPPEQMTIPPSPKSSNPNPNPKPKHVRRVSSAGLQVDSVLGRKTGNIKDVYSLGRKLGQGQFGTTFLCVEKSTGKEFACKSIAKRKLTSPEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARVIVGVVEACHSLGVLHRDLKPENFLFVGHDEESLLKTIDFGLSVFFKPGETFTDVVGSPYYVAPEVLRKFYGQECDVWSAGVIIYILLSGVPPFWDESEQGIFEQVLKGDLDFISEPWPSISDSAKDLVKRMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLTRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKQMFKMIDTDNSGQITLEELKKGLEKVGANLKDSEIVGLMQAADIDNSGTIDYSEFVAAMLHLNKIQKEDHLYAAFSYFDKDGSGYITPDELQHACEQFGLGDVQLDEIIREVDQDNDGRIDYSEFVAMMQDNAFGMKGISNNLRLG*

Click here to download the sequence:
Link to NCBI Protein BLAST