Transcript Information: R_Transcript_303636.p1


Annotated TAIR IDAT1G72220.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27184388-27185629 | Reverse length=413
E-Value3.1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5632402386797
Replicate 23.4257121731855
Replicate 33.9785386351212
Condition 2: 8 Hour
Replicate 11.6753486542852
Replicate 22.8245324430971
Replicate 32.9615785749052
Condition 3: 24 Hour
Replicate 13.6853322128683
Replicate 23.0761282136858
Replicate 35.5295253945846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_303636.p1 GENE.R_Transcript_303636~~R_Transcript_303636.p1 ORF type:complete len:380 (+),score=40.80,zf-RING_2|PF13639.2|1.7e+03,zf-RING_2|PF13639.2|1.9e-14,zf-RING_11|PF17123.1|2e-12,zf-rbx1|PF12678.3|3.3e-09,zf-C3HC4|PF00097.21|1e+03,zf-C3HC4|PF00097.21|3e-07,zf-C3HC4_2|PF13923.2|6.6e-06 R_Transcript_303636:202-1341(+)
ATGGCTTCTTTTCCCAGAAAACTCTTCCCTTATCTTACACCCACTACCAATGAAACAACTATCCCCTGTACTTCTGACTACTGTGACCCTTCTTGCAGTAATTTTGAAGAGTGTTATTCATTCCCGGAACCCGAATGGGTCCCACCAATTCCATCACCGCCATTGTCATCGCCACCAGCCATCGACGTCGGTTACCAAATATCACCGGTTGTGATTGTAGTCATCCTTGTGTTAGGTGGCGCACTTCTTCTTATTACCTACCATGCTGTTCTTGCAAGGTATTTCTCCACCTGGTGGGCCCGGCTACTTGGCCGGAACCGGACCCCACCAGATCCGAGTAATCCACCTGCGGGCCAGGTGACTGATGATCTATTCCGCGACATGGATGATCAACAAGATCCGGTGGTTGATCACCCCATTTGGTTGATCTCCACAATAGGTCTTCAACAATCAGTTATAAATGCCATCACAATGATAAGGTACAAAAGAGGGGAAGGGTTAATAGAAGGGAGTGATTGCTCAGTTTGTCTTAGTGAATTTCAAGAAGGTGAAACTCTTAGGCTATTACCCAAATGTAACCATGCATTTCATATTGATTGTATTGATACATGGCTAAGATCACATACCAACTGTCCTTTATGTCGGGCATGTATAGTGGTGAACTCTGGCAGGCCATCTTTGGCTTCGAACGAGCCGGGTTTATTGACCCGGATGGTTGATTCGGACTCGAGTGAAGTAGAATTAGGCAACAGCCAAACAGAGGATGTTGATAGATGGGTGAGGGAAAATATGGCTGAAAGTGAAACAGGGCAGTTTGAAGTTGATACTACTAATAGTGATCACAACAAGTCTCAAGATAATACCAGTAATAGTAGTAGTAGTAATGAAGGAGGTGGTCGAGTGTTAATAATACAAGAAAGAAGATCTGTTTCAATGGATTTTTCTCATGGATGCAATTCAAGAGATGTGGGGAACCTTCATTTGCAAAGAAACACCAATTCAAGATCATTTACATTAATGACAAACTTTTCACCTTCGAGAAAAGTTCTGCCTATGGCTATTAAGAGGTCATATTCATGGAGTGAAAGAGTGTTTTGGTCAACTCATAATCATCCGAGCAATTCAGATCTCTCTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_303636.p1 GENE.R_Transcript_303636~~R_Transcript_303636.p1 ORF type:complete len:380 (+),score=40.80,zf-RING_2|PF13639.2|1.7e+03,zf-RING_2|PF13639.2|1.9e-14,zf-RING_11|PF17123.1|2e-12,zf-rbx1|PF12678.3|3.3e-09,zf-C3HC4|PF00097.21|1e+03,zf-C3HC4|PF00097.21|3e-07,zf-C3HC4_2|PF13923.2|6.6e-06 R_Transcript_303636:202-1341(+)
MASFPRKLFPYLTPTTNETTIPCTSDYCDPSCSNFEECYSFPEPEWVPPIPSPPLSSPPAIDVGYQISPVVIVVILVLGGALLLITYHAVLARYFSTWWARLLGRNRTPPDPSNPPAGQVTDDLFRDMDDQQDPVVDHPIWLISTIGLQQSVINAITMIRYKRGEGLIEGSDCSVCLSEFQEGETLRLLPKCNHAFHIDCIDTWLRSHTNCPLCRACIVVNSGRPSLASNEPGLLTRMVDSDSSEVELGNSQTEDVDRWVRENMAESETGQFEVDTTNSDHNKSQDNTSNSSSSNEGGGRVLIIQERRSVSMDFSHGCNSRDVGNLHLQRNTNSRSFTLMTNFSPSRKVLPMAIKRSYSWSERVFWSTHNHPSNSDLSP*

Click here to download the sequence:
Link to NCBI Protein BLAST