Transcript Information: R_Transcript_30368.p1


Annotated TAIR IDAT5G60990.1
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24546601-24549148 | Reverse length=456
E-Value8.3E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.258331104452
Replicate 222.361530712425
Replicate 320.595519677258
Condition 2: 8 Hour
Replicate 113.999765833066
Replicate 214.84040588563
Replicate 318.395802691513
Condition 3: 24 Hour
Replicate 126.766950130956
Replicate 227.791604252252
Replicate 326.99156407577


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30368.p1 GENE.R_Transcript_30368~~R_Transcript_30368.p1 ORF type:5prime_partial len:446 (+),score=90.76,DEAD|PF00270.25|2.2e-47,DEAD|PF00270.25|5.6e+03,Helicase_C|PF00271.27|1.3e+03,Helicase_C|PF00271.27|1.6e+03,Helicase_C|PF00271.27|2.8e-28,ERCC3_RAD25_C|PF16203.1|1.3e-05 R_Transcript_30368:1-1338(+)
TTTCGAAATTTCTGGAAGATGGAGGAAGAAAACAGACCAGAAGAAGTGAAATCATTCAAAGAGCTAGGACTATCCGACTCCTTAGTTGAAGCTTGTGAAAGATTAAAATGGACTGCCCCTACCAAAATTCAAGCGGAAGTCTTGCCCCATGCCTTTGAAGGAAAGGATATAATTGGGCTTGCTCAAACTGGGTCTGGTAAAACTGGGGCGTTTGCCTTGCCAATTATTCAGGCACTATTGGATTGCAATCAGCCGTTTTTTGCTCTAGTTCTTTCTCCCACCAGGGAGCTCGCGCTTCAAATTTCTGAACAATTTGAGGCTTTGGGTGCTGATATCGGCTTAAGAATTGCATCGCTTGTTGGTGGAATAGATTTGAATCAACAACAAATTGCCCTTGGAAGACGGCCTCACATCATAGTTGGAACACCTGGGCGTCTAATGGATCACTTGACTAATACCAAGGGATTTTCACTTCGTGCTCTGAAATATCTGGTGCTGGATGAGGCTGACAAATTGCTGAACTTGGAGTTTGAGAAGGCAATTAATGATATTCTAAAAGTTATCCCCCTTGAGCGAAAGACATATTTGTTTTCTGCCACTATGACAAACAAGGTTAAGAAACTCCAGAGGGCTTGTTTAAGGAATCCCGCAAGGATTGAGGCAGCTTCTAAATATTCAACAGTTGACACATTGAAGCAGCAGATTTGTTTCATTCCCGCTAAATACAAGGATTGCTACCTTGTATATATTCTAACGGAGATGTCTGGAAGTACATCAATGGTTTTTACTCGCACATGTGAAGCAACCCGTCTTTTGGCACTGATGCTCCGCAATCTCGGTTTAAGGGCTATTGCGATTAGTGGCCAAATGAGCCAGCCTAAAAGACTTGGAGCCTTAAACAAGTTTAAAGCTGGAGAATGTAATGTCCTTATCTGCACTGACGTAGCCAGCAGAGGCCTTGATATTCCTTCTGTGGATATGGTCATAAATTATGATATCCCGTCTAATTCTAAGGATTACATACATCGGGTTGGGAGAACAGCTCGTGCTGGGAGGTCGGGTGTTGCCATCTCATTAATAAATCAATACGAGGTTGAGTGGTTCCAGCAGATAGAGACCCTGATAGGGAAGAAATTAGATATGTACCCTGTTGAGGAGGAGGAAGTTTTGCTTTTGATGGAACGTGTGACTGAGGCAAAGAGGATTTCACATATGAAACTCAAGGAGTCTGGTGGAAAGAAGAGAAGGAAGGAGATGGGCGATGATGATGCAGAGGAGATTGAGAAGTACTTGGGCCATAAAAAAAGTGGCAAAAGTTCCAAGAAAATGAGAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30368.p1 GENE.R_Transcript_30368~~R_Transcript_30368.p1 ORF type:5prime_partial len:446 (+),score=90.76,DEAD|PF00270.25|2.2e-47,DEAD|PF00270.25|5.6e+03,Helicase_C|PF00271.27|1.3e+03,Helicase_C|PF00271.27|1.6e+03,Helicase_C|PF00271.27|2.8e-28,ERCC3_RAD25_C|PF16203.1|1.3e-05 R_Transcript_30368:1-1338(+)
FRNFWKMEEENRPEEVKSFKELGLSDSLVEACERLKWTAPTKIQAEVLPHAFEGKDIIGLAQTGSGKTGAFALPIIQALLDCNQPFFALVLSPTRELALQISEQFEALGADIGLRIASLVGGIDLNQQQIALGRRPHIIVGTPGRLMDHLTNTKGFSLRALKYLVLDEADKLLNLEFEKAINDILKVIPLERKTYLFSATMTNKVKKLQRACLRNPARIEAASKYSTVDTLKQQICFIPAKYKDCYLVYILTEMSGSTSMVFTRTCEATRLLALMLRNLGLRAIAISGQMSQPKRLGALNKFKAGECNVLICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLINQYEVEWFQQIETLIGKKLDMYPVEEEEVLLLMERVTEAKRISHMKLKESGGKKRRKEMGDDDAEEIEKYLGHKKSGKSSKKMRK*

Click here to download the sequence:
Link to NCBI Protein BLAST