Transcript Information: R_Transcript_304029.p1


Annotated TAIR IDAT5G61400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24681550-24683514 | Forward length=654
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12945362379233
Replicate 20
Replicate 30.16245913188761
Condition 2: 8 Hour
Replicate 10.17365861664713
Replicate 20.15858781447649
Replicate 30.25746965418989
Condition 3: 24 Hour
Replicate 10.16282132785606
Replicate 20
Replicate 30.46569584440207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_304029.p1 GENE.R_Transcript_304029~~R_Transcript_304029.p1 ORF type:internal len:141 (+),score=20.20,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|3.4e-17,PPR_2|PF13041.2|6.7e-16,PPR_2|PF13041.2|9.3e-16,PPR_2|PF13041.2|0.0025,PPR_1|PF12854.3|5.1e-12,PPR_1|PF12854.3|2e-07,PPR_1|PF12854.3|7.7e-09,PPR_1|PF12854.3|4.1e-07,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|6.5e-11,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.0022,PPR_3|PF13812.2|1.6e-08,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|8.2,MRP-S27|PF10037.5|0.0015,MRP-S27|PF10037.5|7.3,MRP-S27|PF10037.5|0.25 R_Transcript_304029:1-420(+)
AAGATGAAAAGTAAGGGCATCGTTGCAAATTCTTTGACGTACAACTCACTTATAAATGGACACTGCAAACATGGAAACATGGAAAAAGCTCTGGAGTTGTGTTCACAAATGATGCAAGAGGGTATACAACCAAATGTCGTTACTTTCGCTTCCCTCATACATGGTTATAGTCAAGCCAGGGATATGGAGGCTGCAATGGGAATATATACAGAAATGATAATCAAAGGTGTTTCACCTGATGTTGTCACCTACACAGTTTTACTGGATGGGCATTTCAAAAATGCAGATACAAAGACTGCTCTTCAGATGTACAGAGAAATGCGAGACGCTGGACTCATCCCTAATGCTTTCACCATCAGTTGTGTAATTGATGGACTGTGCAAAGATGGATATCTAAATAAAGCCTTCAAGATATTCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_304029.p1 GENE.R_Transcript_304029~~R_Transcript_304029.p1 ORF type:internal len:141 (+),score=20.20,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|3.4e-17,PPR_2|PF13041.2|6.7e-16,PPR_2|PF13041.2|9.3e-16,PPR_2|PF13041.2|0.0025,PPR_1|PF12854.3|5.1e-12,PPR_1|PF12854.3|2e-07,PPR_1|PF12854.3|7.7e-09,PPR_1|PF12854.3|4.1e-07,PPR|PF01535.16|3.2e+03,PPR|PF01535.16|6.5e-11,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|0.0022,PPR_3|PF13812.2|1.6e-08,PPR_3|PF13812.2|0.00047,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|8.2,MRP-S27|PF10037.5|0.0015,MRP-S27|PF10037.5|7.3,MRP-S27|PF10037.5|0.25 R_Transcript_304029:1-420(+)
KMKSKGIVANSLTYNSLINGHCKHGNMEKALELCSQMMQEGIQPNVVTFASLIHGYSQARDMEAAMGIYTEMIIKGVSPDVVTYTVLLDGHFKNADTKTALQMYREMRDAGLIPNAFTISCVIDGLCKDGYLNKAFKIFL

Click here to download the sequence:
Link to NCBI Protein BLAST