Transcript Information: R_Transcript_3047.p1


Annotated TAIR IDAT1G43260.1
Annotated Gene NamehAT transposon superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16318253-16319234 | Forward length=294
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.535193935727
Replicate 23.5625491681083
Replicate 34.7963566085807
Condition 2: 8 Hour
Replicate 14.2430379691977
Replicate 23.955535054939
Replicate 34.3904617746062
Condition 3: 24 Hour
Replicate 14.6412895478391
Replicate 22.3886561975354
Replicate 35.6892228789047


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3047.p1 GENE.R_Transcript_3047~~R_Transcript_3047.p1 ORF type:3prime_partial len:277 (+),score=44.59,DUF659|PF04937.11|1.3e-14 R_Transcript_3047:199-1026(+)
ATGGACTCTAATCCCTCTACTGGATCAAATGATAGTGGGGACCCGGCTACAAAATATGCCACCCAAGACCCTCACAAAATAAGTGTTTTCATTTGTAATTTTTGCCAAAAAAAAAGTAGTGGAGGAGTCTATAGAGTGAAGCAACATTTGGTTGGTGGATTTAGGAATGTAACAAAATGTATGAAATGTCCTGAGCATGTAAGAGAAGAAATTAAGTCTTTTATGCTAAAGAAACAATTGGCTAAGGATGAGAGTCAAATGTTCCCTAGAATTCCACAATACGATGATGAGTATGATGACGAAGAAGAAGATTGTGTTGAGGTAGATACGAACCATTCAAGTGGTGTGAAAAGATTAAGTGGTGGTAGTTCAAATAGCAAGTATCTTCCTAAAAAGAAACCAAAACAACAGGGTCTTCTTGACTTGTATTTTGCTCCTAATCCCGAAGATGTTTTAAAAGGTAGAAAGGATGGAAAAGGAGGAAGACAACAAACCATCAATGAGGTTTGTGCAAAAGAAAAAAGAGACATGGCATGTAGGTGGATAGCTAGGTGGTTTTATGATGCCGGTATCCCATTTCATGCCGCAACTTATGATAGTTTTCATGTCATGATTGACCAAATTGGACGATTTGGTCCCGGGATGAAACCACCTACCATGCATGAGATTAGAGTTCCTTTACTTAAACAAGAAGTGAATGACACCCAAGTGATCGTGAATGACCATAAGAAAGAATGGGCACAAAAAGGTTGTTCAATCTTATCCGATGGGTGGCGTGATTCCGTTGTGCAAAAGGACATAGTGAACTTTTTAGTGAACTCTCCAAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3047.p1 GENE.R_Transcript_3047~~R_Transcript_3047.p1 ORF type:3prime_partial len:277 (+),score=44.59,DUF659|PF04937.11|1.3e-14 R_Transcript_3047:199-1026(+)
MDSNPSTGSNDSGDPATKYATQDPHKISVFICNFCQKKSSGGVYRVKQHLVGGFRNVTKCMKCPEHVREEIKSFMLKKQLAKDESQMFPRIPQYDDEYDDEEEDCVEVDTNHSSGVKRLSGGSSNSKYLPKKKPKQQGLLDLYFAPNPEDVLKGRKDGKGGRQQTINEVCAKEKRDMACRWIARWFYDAGIPFHAATYDSFHVMIDQIGRFGPGMKPPTMHEIRVPLLKQEVNDTQVIVNDHKKEWAQKGCSILSDGWRDSVVQKDIVNFLVNSPK

Click here to download the sequence:
Link to NCBI Protein BLAST