Transcript Information: R_Transcript_3048.p1


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value3E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6682813775818
Replicate 21.8061333691439
Replicate 31.4162767868589
Condition 2: 8 Hour
Replicate 11.5797332224029
Replicate 21.7431870252537
Replicate 31.4150449139549
Condition 3: 24 Hour
Replicate 12.2217232801004
Replicate 22.0750915622855
Replicate 31.3532720639748


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3048.p1 GENE.R_Transcript_3048~~R_Transcript_3048.p1 ORF type:5prime_partial len:372 (+),score=96.00,Dimer_Tnp_hAT|PF05699.10|5.8e-13 R_Transcript_3048:2-1117(+)
AAAGATTGGATGAAGGATTCCGCTAGAAAAAAAGTGGCATCCTATCTTTTACAAGATTCTTTTTGGAGAAATATTGTTTATGCTCTCAAATTGACGGGTCCTCTTGTTAAAGTTCTTAGAATGGTTGGTGGAGATAAGAAGCCGGCCATGGGTTATATTTATGAGGCAATGGATAGGGCTAAGGAGGCAATTGCAAATAGCTTTAGGCAAAAAGAAGATCAATACAAGGGAGCATTTGAGATTATTGATGCTAGGTGGGATTGTCAACTCCATAAGCCTTTACATGCCGCCGGGTACTTCTTGAACCCCGAGATGTATTATGGAAATGAGATCGATGCAAGTTGTGAAGAAGTTATGCGAGGCTTATATGATTGTATCTCAAGGTTGGTACCGGATTTGGAAACTCAAGATAAGATTGAGCAAGAGTTGGATGTATACAAAAATGGTACTGGTCTTTTTGCTTTACCCATGGCAATAAGACATAGGAAGACAAAAGCTCCAGCGGATTGGTGGTCTTCATTTGGATCCTCTACTCCTAACTTGCAAAAGTTTGCTATTCGGGTTCTTAGTTTGACATGTAGTGCTACAAGTTGTGAGAGGAATTGGGGGGTTTTCCAACATCTCCATACAAAGAAGAGGAATAGATTGGCACAAGAATGGTTGAATGACTTGGTGTTTGTGAAGTATAATTGTGCTTTGAAATGCCGATCCAAAATGAAGGACCTTGTCAATCCAATTCTTATGATAGAGATTGATCACAGCAATGAGTGGCTACTTGGTAGGATGGATGAGGATGACGAGTATGATGTTGATTTTGTGTTTGAGGGAGAGGACTTGACATGGAGTGCAGTTGCTCGAGTTTCTAGGGCGAATGATCCAGCTTATAATACTAGAGCATCAAGGTTGCAAAAACATGTGGCAAGCACATCAAAAACTGATAAAGGAAAGGGTATTGCATCTTCTCATGGATCACAACCTCCCAAAGTTGCCATGCTTGATATTGATGATGATGAAGAAGAGTTGGACTTGGAGGAGGACATTGAAGTGTCAGGATCGGAAGAGGATGAGGATGTTGTGCTTGGCTACGATGATGAGGATGAAGATGACGATATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3048.p1 GENE.R_Transcript_3048~~R_Transcript_3048.p1 ORF type:5prime_partial len:372 (+),score=96.00,Dimer_Tnp_hAT|PF05699.10|5.8e-13 R_Transcript_3048:2-1117(+)
KDWMKDSARKKVASYLLQDSFWRNIVYALKLTGPLVKVLRMVGGDKKPAMGYIYEAMDRAKEAIANSFRQKEDQYKGAFEIIDARWDCQLHKPLHAAGYFLNPEMYYGNEIDASCEEVMRGLYDCISRLVPDLETQDKIEQELDVYKNGTGLFALPMAIRHRKTKAPADWWSSFGSSTPNLQKFAIRVLSLTCSATSCERNWGVFQHLHTKKRNRLAQEWLNDLVFVKYNCALKCRSKMKDLVNPILMIEIDHSNEWLLGRMDEDDEYDVDFVFEGEDLTWSAVARVSRANDPAYNTRASRLQKHVASTSKTDKGKGIASSHGSQPPKVAMLDIDDDEEELDLEEDIEVSGSEEDEDVVLGYDDEDEDDDI*

Click here to download the sequence:
Link to NCBI Protein BLAST