Transcript Information: R_Transcript_304850.p1


Annotated TAIR IDAT1G09820.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3190594-3192414 | Reverse length=606
E-Value7E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0235305208254
Replicate 20
Replicate 30.21408165977713
Condition 2: 8 Hour
Replicate 10.22883985932005
Replicate 20.20898020412323
Replicate 31.187488545259
Condition 3: 24 Hour
Replicate 10.64367683815993
Replicate 20.20612391486521
Replicate 30.81823195091205


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_304850.p1 GENE.R_Transcript_304850~~R_Transcript_304850.p1 ORF type:3prime_partial len:107 (+),score=15.77,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|7.3e-12,PPR_2|PF13041.2|5.7e-17,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|8.4e-11,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|3.2e-05,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2.3 R_Transcript_304850:386-703(+)
ATGAAGAAGAGAAATCTGTGGCCTGATATTTCAACTTATAACTGCTTGATAGGTGGCTTCTACAGAAATGGAGATTTTCAAGCTGGTGATGATCTCGTAAACAAAATCAAGGAAATGGGGCATAAATTTGATACAGTGACATATAACATAAGCCTAGGTGCGTTGTGCCAGAAAGGTGAGACAAGAAATGCAGTTAGGGTATTGGATGAAATGTTTGAGATGGGTTTGACTCCAAATCATGTGACCTACAATACCTTGATTGGTGGCTACTGTAGGGAAGGAAATCTTGGGGCTTCTATGACTATGAGAACGAGAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_304850.p1 GENE.R_Transcript_304850~~R_Transcript_304850.p1 ORF type:3prime_partial len:107 (+),score=15.77,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|7.3e-12,PPR_2|PF13041.2|5.7e-17,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|1.2e-07,PPR_1|PF12854.3|8.4e-11,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|3.2e-05,PPR_3|PF13812.2|6.7e+03,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|2.3 R_Transcript_304850:386-703(+)
MKKRNLWPDISTYNCLIGGFYRNGDFQAGDDLVNKIKEMGHKFDTVTYNISLGALCQKGETRNAVRVLDEMFEMGLTPNHVTYNTLIGGYCREGNLGASMTMRTRM

Click here to download the sequence:
Link to NCBI Protein BLAST